 Solution

Two layers need not have the same electronic structure everywhere. Different rotational alignments create domains of twisted bilayer graphene; AB-stacked regions instead have the usual coupled low-energy bilayer bands. In a twisted domain, displaced Dirac cones hybridize where they meet, producing avoided crossings and saddle points in the two-dimensional dispersion relation. The resulting Van Hove singularities enhance optical transitions at energies that depend on the twist angle. Different domains therefore absorb different parts of the visible spectrum and can show different colours despite having the same layer count.^[ref]

On a silicon/silicon-dioxide substrate, reflected beams from the film stack also interfere. The wavelength-dependent optical response of the bilayer graphene changes this reflected contrast, making the domain differences visible. The observation is consistent with stacking domains; colour alone does not uniquely prove a twist angle. Variations in oxide thickness, trapped contamination, folds or local doping can also change contrast and should be checked independently, for example by Raman spectroscopy.