bsub get job stdout and stderr
New to topics? Read the documentation here!
By default, LSF only sends you an email with the stdout and stderr included in it, and does not show or store anything locally.
One option to store things locally is to use:as documented at:
bsub -oo stdout.log -eo stderr.log 'echo myout; echo myerr 1>&2'Or to use files with the job id in them:
bsub -oo %J.out -eo %J.err 'echo myout; echo myerr 1>&2'By default To get just the stdout to the file, use as mentioned at:
bsub -oo:- also contains the LSF metadata in addition to the actual submitted process stdout
- prevents the completion email from being sent
bsub -N -oo which:- stores only stdout on the file
- re-enables the completion email
Another option is to run with the bsub This immediately prints stdout and stderr to the terminal.
-I option:bsub -I 'echo a;sleep 1;echo b;sleep 1;echo c'