Non-bonding electrons are the electrons in an atom that are not involved in forming bonds with other atoms. They are typically found in the outermost shell, or valence shell, of an atom. Non-bonding electrons can be divided into two categories: 1. **Lone Pairs**: These are pairs of electrons that are localized on a single atom and do not participate in bonding.
Network covalent bonding is a type of chemical bonding that occurs when atoms are connected to each other through covalent bonds in a continuous, three-dimensional network. This type of bonding results in the formation of large structures where each atom is bonded to several adjacent atoms, creating a rigid and stable arrangement.
In chemistry, the term "nascent state" refers to a newly formed species that is in a highly reactive form. This term is often used in the context of nascent hydrogen, which pertains to hydrogen atoms that have just been liberated from a compound and are in a state that makes them very reactive, as opposed to being part of a stable molecule like molecular hydrogen (H₂). The concept of nascent species is important in various chemical reactions and processes.
Multi-state modeling of biomolecules is a computational approach used to study the dynamic behavior and structural transitions of biomolecules, such as proteins, nucleic acids, and complex biological systems. The core idea is that biomolecules can exist in multiple conformational states, and their function is often linked to these various states and the transitions between them. ### Key Concepts in Multi-state Modeling: 1. **Conformational States**: Biomolecules often adopt multiple conformations due to their inherent flexibility.
The Morse potential is a mathematical model used to describe the interaction energy between a pair of atoms in a diatomic molecule as a function of their separation distance. It is particularly useful for modeling the behavior of molecular vibrations and is more accurate for describing the potential energy characteristics of bonded systems compared to the simpler harmonic oscillator model.
Molecular Orbital (MO) Theory is a fundamental theoretical framework in chemistry that describes the electronic structure of molecules by considering the combination of atomic orbitals to form molecular orbitals. Unlike Valence Bond (VB) Theory, which emphasizes localized bonds between pairs of atoms, MO Theory provides a more delocalized view of electrons in a molecule.
A molecular orbital (MO) diagram is a graphical representation of the molecular orbitals in a molecule. It is used to visualize how atomic orbitals combine to form molecular orbitals when atoms come together to form molecules. The key aspects of molecular orbital diagrams include: 1. **Atomic Orbitals**: The starting point for constructing an MO diagram involves identifying the atomic orbitals of the individual atoms that will combine. Common atomic orbitals include s, p, d, and f orbitals.
Metal–ligand multiple bonds refer to the formation of multiple bonds between a metal center (often a transition metal) and a ligand, which is a molecule or ion that can donate at least one pair of electrons to the metal. The most common types of multiple bonds in coordination chemistry are double and even triple bonds, which can occur in specific metal-ligand complexes. ### 1.
Metallophilic interactions refer to attractive interactions that occur between metal ions or metal-containing species. These interactions can happen due to various factors, including electron sharing, dipole-dipole interactions, and the spatial arrangement of metal centers. Metallophilic interactions are often studied in the context of coordination chemistry, organometallic chemistry, and materials science.
Metallic bonding is a type of chemical bonding that occurs between metal atoms. In this bond, electrons are not shared or transferred between individual atoms as seen in covalent or ionic bonds. Instead, metallic bonding involves a "sea of electrons" that are free to move around in a lattice of positive metal ions.
The mesomeric effect, also known as resonance effect, refers to the delocalization of electrons within a molecule that occurs through the overlap of p-orbitals. This effect contributes to the stability and reactivity of molecules by allowing the distribution of electron density across multiple atoms rather than being localized between two specific atoms.
A low-barrier hydrogen bond (LBHB) is a type of hydrogen bond that has a shorter distance and a lower energy barrier compared to typical hydrogen bonds. In a typical hydrogen bond, the interaction between a hydrogen atom and an electronegative atom (like oxygen or nitrogen) results in a relatively stable bond, but the energy barrier for forming or breaking such bonds is usually higher. In contrast, LBHBs exhibit characteristics that allow them to form more easily and break more readily.
A lone pair refers to a pair of valence electrons that are not shared with another atom and remain localized on a single atom. These electrons are often found in the outermost shell of an atom and can influence the atom's chemical behavior, including bond angles and molecular geometry. Lone pairs are important in the formation of molecular shapes, as they can repel other electron pairs (both bonding and lone pairs) according to the principles of VSEPR (Valence Shell Electron Pair Repulsion) theory.
London dispersion forces, also known as dispersion forces or van der Waals forces, are a type of weak intermolecular force that arise from temporary fluctuations in the electron distribution within molecules or atoms. These fluctuations lead to the creation of temporary dipoles, which can induce dipoles in neighboring molecules, resulting in an attractive force between them.
Linnett double-quartet theory refers to a theoretical model in chemistry that describes the electronic structure of certain types of molecular systems, specifically focusing on the behavior of electrons in larger, complex molecules. While there is limited information available on this specific term, it generally relates to concepts in molecular orbital theory and may involve discussions of resonance, electron coupling, and the stability of certain arrangements of atoms in molecules.
Linkage isomerism is a type of isomerism found in coordination compounds. It arises when a ligand can coordinate to a metal center in more than one way, leading to different structural arrangements. In linkage isomerism, the position of the binding site of a ligand changes. For example, some ligands contain multiple donor atoms, where only one of those atoms binds to the metal ion at a time.
Ligand field theory (LFT) is a theoretical framework used in coordination chemistry to describe the electronic structure and properties of transition metal complexes. It builds upon and extends the concepts of crystal field theory (CFT), which focuses on the impact of surrounding ligands (molecules or ions that coordinate to a metal center) on the d-orbital energies of transition metals.
A ligand-dependent pathway refers to a signaling mechanism in which the binding of a specific ligand (usually a molecule such as a hormone, neurotransmitter, or other signaling substance) to its corresponding receptor triggers a cascade of biological responses within a cell. This pathway is characterized by the requirement for the ligand to bind to the receptor in order for the signaling event to occur.
The term "ligand bond number" isn't standard terminology in chemistry. However, it may relate to the coordination of ligands to a central metal atom in coordination chemistry. In this context, the term "bond number" might refer to the number of bonds that a ligand forms with a central metal atom or ion in a coordination complex.
A ligand binding assay is a laboratory technique used to study the interaction between a ligand (a molecule that binds to another molecule, typically a protein) and its target, often a receptor or enzyme. These assays are crucial in drug development and pharmacology as they help to understand the binding affinity, specificity, and kinetics of ligands, which can include small molecules, peptides, or antibodies.

Pinned article: Introduction to the OurBigBook Project

Welcome to the OurBigBook Project! Our goal is to create the perfect publishing platform for STEM subjects, and get university-level students to write the best free STEM tutorials ever.
Everyone is welcome to create an account and play with the site: ourbigbook.com/go/register. We belive that students themselves can write amazing tutorials, but teachers are welcome too. You can write about anything you want, it doesn't have to be STEM or even educational. Silly test content is very welcome and you won't be penalized in any way. Just keep it legal!
We have two killer features:
  1. topics: topics group articles by different users with the same title, e.g. here is the topic for the "Fundamental Theorem of Calculus" ourbigbook.com/go/topic/fundamental-theorem-of-calculus
    Articles of different users are sorted by upvote within each article page. This feature is a bit like:
    • a Wikipedia where each user can have their own version of each article
    • a Q&A website like Stack Overflow, where multiple people can give their views on a given topic, and the best ones are sorted by upvote. Except you don't need to wait for someone to ask first, and any topic goes, no matter how narrow or broad
    This feature makes it possible for readers to find better explanations of any topic created by other writers. And it allows writers to create an explanation in a place that readers might actually find it.
    Figure 1.
    Screenshot of the "Derivative" topic page
    . View it live at: ourbigbook.com/go/topic/derivative
  2. local editing: you can store all your personal knowledge base content locally in a plaintext markup format that can be edited locally and published either:
    This way you can be sure that even if OurBigBook.com were to go down one day (which we have no plans to do as it is quite cheap to host!), your content will still be perfectly readable as a static site.
    Figure 5. . You can also edit articles on the Web editor without installing anything locally.
    Video 3.
    Edit locally and publish demo
    . Source. This shows editing OurBigBook Markup and publishing it using the Visual Studio Code extension.
  3. https://raw.githubusercontent.com/ourbigbook/ourbigbook-media/master/feature/x/hilbert-space-arrow.png
  4. Infinitely deep tables of contents:
    Figure 6.
    Dynamic article tree with infinitely deep table of contents
    .
    Descendant pages can also show up as toplevel e.g.: ourbigbook.com/cirosantilli/chordate-subclade
All our software is open source and hosted at: github.com/ourbigbook/ourbigbook
Further documentation can be found at: docs.ourbigbook.com
Feel free to reach our to us for any help or suggestions: docs.ourbigbook.com/#contact