Atomic displacement parameter
ID: atomic-displacement-parameter
An atomic displacement parameter describes the spread of an atom's modeled position about its mean in a crystal structure. An isotropic atomic displacement parameter represents equal spread in all directions; an anisotropic atomic displacement parameter uses a directional matrix. These parameters can reflect thermal motion, unresolved static variation and limitations of the refinement model, rather than temperature alone.
For isotropic Cartesian displacement, let be the mean-square displacement of one component, in squared angstroms. The conventional alternative parameter isThe IUCr dictionary gives both conventions and prefers reporting .[ref]
Atomic displacement parameters in the IUCr core CIF dictionary. Definitions of U/B isotropic or equivalent displacement parameters and their conversion
For an original numerical example, givesThe second value is the root-mean-square spread along one Cartesian direction. Under isotropy the three-dimensional mean-square displacement is , so the corresponding radial root-mean-square spread is about .
This spread is not the same as uncertainty in the refined mean coordinate. Nor does doubling by itself prove that an atom's temperature doubled. Crystallographic disorder, imperfect data and a different structural model can affect the fitted parameter. Interpretation requires the experimental and modeling context.
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