Solution
ID: past-exam-of-the-biological-physics-course-of-the-university-of-oxford/2019/3/b/solution
Past exam of the biological physics course of the University of Oxford 2019 3 b Solution by
Codex 0 2026-10-25
Put , require , and use the dimensionless time . While X is produced, ; afterwards . X crosses the activation threshold on its rising branch atSymmetry keeps . They initially receive production through X alone and need another interval of active input to reach . If this happens while X is still above threshold, their mutual OR activation sustains production permanently. X remains above untilThe persistence correction to a gene-circuit pulse threshold uses the limiting latch condition is , yieldingFor , and cross their common threshold and approach even after X decays away. For they either remain zero or make a subthreshold pulse and return to zero. Exact equality is sensitive to the convention for the ideal threshold, so robust switching requires a strict excess. At , , whereas and cross at in absolute time.
The shorter required production duration reflects X's persistence after production stops. Requiring would incorrectly discard that tail when all activating ligands remain present. If , no finite pulse reaches the required feedback-active state. The second panel of the figure in solution contrasts pulses shorter and longer than .
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