Let
and estimate it by the average of the two within-sample empirical covariance operators. Let be its leading empirical eigenpairs and let be the sample means. Use the Two-sample FPCA mean statistic
Under , the Hilbert-space central limit theorem gives
where is a centered Gaussian random element with covariance . Distinct eigenvalues give consistent empirical eigenpairs, up to signs, and the standardized leading scores are independent standard normal variables. Hence
Rejecting above the quantile gives an asymptotic level- test.
Under a fixed alternative ,
The test is consistent whenever one retained projection is nonzero. Alternatives orthogonal to the first eigenfunctions are invisible at fixed . Under local alternatives , the limit is noncentral chi-squared with noncentrality .

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