Praat

Praat is software for analyzing, synthesizing, annotating and manipulating speech, created by Paul Boersma and David Weenink. It makes the connection between a recorded acoustic signal and measurable speech properties explicit: a waveform, a spectrogram, a pitch contour and estimated formants describe different aspects of the same recording.^[ref]

For a sustained vowel, one can compare the repeating structure of the waveform with the estimated fundamental frequency, then examine how the frequency spectrum is shaped by the vocal tract. A change in vowel quality need not be a change in pitch. Annotations can align intervals with phonemes or syllables without treating every acoustic boundary as an unambiguous linguistic boundary.

Measurements depend on the analysis settings and the signal. In particular, a displayed pitch contour can contain octave errors, while estimated formants depend on the analysis model. Inspecting the recorded sound and analysis assumptions is therefore part of the experiment, rather than accepting every displayed trajectory as ground truth.