Solution

ID: past-exam-of-the-biological-physics-course-of-the-university-of-oxford/2015/5/a/solution

At thermal equilibrium, detailed balance equates the opposing transition fluxes: . Define the state free energy difference explicitly by . The equilibrium Boltzmann distribution then gives
Any state degeneracy is included in the state free energies. Detailed balance is stronger than simply requiring a time-independent total occupancy: it equates each pair of equilibrium transition fluxes.
Source illustration TODO: the source's reaction coordinate diagram is missing. The definition above fixes the sign independently; no barrier heights or ordering of drawn energy levels are inferred. Below, a large forward free-energy drop means . If instead , forward transitions are unfavorable: for example gives , so neglecting reverse transitions would be wrong.

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