EF-G 2026-10-20
A bacterial GTPase promoting ribosomal translocation. Its nucleotide-exchange kinetics differ from those of EF-Tu, so it does not require EF-Ts for recycling.
EF-Tu 2026-10-20
A bacterial translational GTPase delivering aminoacyl-tRNA to the ribosome. Correct decoding promotes its hydrolysis cycle; EF-Ts accelerates nucleotide exchange for reuse.
GDP–GTP exchange resets translation factors after GTP hydrolysis; it does not phosphorylate bound GDP back into GTP. A guanine nucleotide exchange factor lowers nucleotide affinity, allowing bound GDP to leave. The cytosolic nucleotide pool then supplies GTP. The GTP-bound and GDP-bound conformations bind different partners, while the ribosome and associated factors control when hydrolysis occurs. This couples repeated factor use to the ordered steps of biological translation.
During bacterial elongation, EF-Tu binds GTP and an aminoacyl-tRNA, delivering it to the ribosomal A site. Correct codon–anticodon recognition promotes rearrangements and GTPase activation. Hydrolysis and phosphate release permit EF-Tu departure and tRNA accommodation; rejection before and after hydrolysis contributes to kinetic proofreading. The GDP-bound factor is poorly suited to another delivery cycle until EF-Ts accelerates nucleotide exchange. Structural analysis of their complex showed disruption of the magnesium-binding environment, explaining reduced nucleotide affinity rather than a transfer of phosphate onto bound GDP.[ref]
The structure of the Escherichia coli EF-Tu.EF-Ts complex at 2.5 A resolution by T. Kawashima and others. Kawashima and colleagues, 1996, abstract and nucleotide-binding-site structural analysis
The analogous eukaryotic delivery factor eEF1A is recycled by the eEF1B exchange machinery.After peptide-bond formation, EF-G uses GTP in promoting bacterial ribosomal translocation; eEF2 performs the corresponding eukaryotic role. GDP release and GTP binding again regenerate active factor, but EF-G does not depend on EF-Ts for recycling in the way EF-Tu does: its nucleotide exchange is sufficiently rapid under physiological conditions. The contrast matters because “every translational GTPase requires its own exchange factor” would be incorrect. Different factors employ a common nucleotide switch with different exchange kinetics and regulatory partners.
Exchange also regulates initiation. eIF2–GTP carries initiating methionyl-tRNA in a ternary complex. Start-site recognition is coupled to its GTPase cycle and release in the GDP form; eIF2B supplies exchange for another round. Stress-induced phosphorylation of eIF2's alpha subunit inhibits productive exchange by eIF2B and lowers ternary-complex availability. Overall initiation falls, while particular messages with regulatory upstream open reading frames, including ATF4, can be translated more efficiently. Experiments manipulating those upstream reading frames establish how changing initiation-factor availability changes the choice of initiation site.[ref]
Reinitiation involving upstream ORFs regulates ATF4 mRNA translation in mammalian cells by Krishna M. Vattem and Ronald C. Wek. Vattem and Wek, 2004, results on upstream reading frames and ATF4 reinitiation
This is regulation of the rate of regeneration, not an alteration of the genetic code.In bacterial termination, the RF3 GTPase assists recycling of class-I release factors; hydrolysis of peptidyl-tRNA itself is catalysed by the release factor, not directly by GTP cleavage. Likewise, peptide-bond formation draws on the activated ester linkage of charged tRNA, whose preparation consumed ATP. Approximately two elongation GTP molecules are used per incorporated residue, one for delivery and one for translocation, apart from initiation, termination and exceptional events. Nonhydrolysable GTP analogues, exchange-factor depletion and nucleotide-release measurements distinguish binding, hydrolysis and exchange. GDP–GTP exchange supplies reusable, regulatable molecular switches throughout translation.