An isogeny of elliptic curves over is a nonconstant -morphism which sends to . A nonconstant morphism of smooth projective curves is finite and surjective. Its compatibility with the elliptic curve group law from Riemann-Roch can be seen without assuming it in the definition.
Identify a point with the degree-zero divisor class . A finite morphism pushes forward divisors, and pushes a principal divisor to the principal divisor of the norm of its rational function. It therefore induces a group homomorphism on degree-zero Picard groups of a curve. On geometric points, the pushforward of is . Since point addition is addition of these divisor classes, this proves
The equality is defined over , so in particular it holds on the groups of -rational points and after every field extension. The argument also covers inseparable isogenies of elliptic curves; separability is not part of the definition.

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