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Scaffold pore connectivity describes how void spaces in a tissue-engineering scaffold communicate with one another and with the exterior. It affects which regions are accessible to fluid, transported substances and migrating cells. Porosity gives the amount of void space, whereas connectivity describes its arrangement. Two scaffolds with the same porosity can contain either communicating channels or isolated cavities.

A useful idealization represents pores as vertices of a graph and communicating throats as edges. Label the pores reached from an inlet by flood fill or another graph traversal. One explicitly defined accessibility measure isIf seven equal-volume pores out of ten communicate with the inlet, $C_{\mathrm{in}}=0.7$. That does not establish through-flow: the connected region must also reach an outlet. A large inlet-accessible dead-end region can have the same $C_{\mathrm{in}}$ as a region that spans the specimen.

The size of a passage also matters. A throat can pass a small dissolved molecule while excluding a larger rigid probe. An accessibility analysis can therefore specify both a boundary and a probe diameter. Actual cells can deform and interact with surfaces, so a rigid-probe geometry calculation is a model of access, not a complete prediction of cell migration.

Micro-computed tomography provides three-dimensional structural data for such questions. Michael J. Moore and colleagues published a quantitative scaffold-interconnectivity method using this approach.^[ref] After image segmentation separates solid and void, the connectivity result depends on resolution and the rule used to connect neighboring image elements. Apparent diagonal contact in an image does not necessarily establish a finite open throat.

A transport experiment supplies complementary evidence. Apply a stated pressure difference, measure flow and compare with the imaged pathways. A connected scaffold can still have low intrinsic permeability because narrow throats restrict transport. Reporting porosity, an explicitly defined connectivity measure and a flow measurement therefore answers three related but distinct questions.

A tissue-engineering scaffold is a material structure that supplies an initial architecture and local environment for cells in a tissue construct. It can provide attachment surfaces, mechanical support and paths for transport while cells form extracellular matrix. Some designs undergo scaffold degradation; others are intended to persist. A scaffold is therefore part of a developing cell–material system rather than merely a mould shaped like an organ.

Important design variables include material chemistry, biocompatibility, pore geometry, mechanical response and transport. Porosity measures the fraction of volume occupied by voids, but scaffold pore connectivity determines whether those spaces form communicating paths. For example, $30\mathrm{m}{\mathrm{m}}^3$ of solid in a $100\mathrm{m}{\mathrm{m}}^3$ envelope gives porosity $1-30/100=0.70$. The same porosity could describe connected channels or isolated cavities; the two structures need not admit the same fluid flow or access for cells.

Under an ideal Darcy law model for steady flow through a saturated scaffold slab,where $k$ is the intrinsic permeability, $A$ the area normal to flow, $L$ the thickness and $\mu$ the fluid’s dynamic viscosity. Taking illustrative $k=10^{-12}{\mathrm{m}}^2$, $A=10^{-4}{\mathrm{m}}^2$, $L=5\times 10^{-3}\mathrm{m}$, $\mu =10^{-3}\mathrm{Pa}\mathrm{s}$ and $\Delta p=100\mathrm{Pa}$ gives $Q=2\times 10^{-9}{\mathrm{m}}^3{\mathrm{s}}^{-1}=0.12\mathrm{mL}\mathrm{mi}{\mathrm{n}}^{-1}$. Doubling $L$ halves the predicted flow at fixed pressure difference. These chosen parameters are a transport example, not a measured scaffold or a biological operating limit.

The Darcy law calculation averages over the pore network. It does not reveal local shear stress, dead-end pores or gradients of oxygen within the construct. A useful experiment therefore combines measurements of geometry and flow with spatial observations of cell viability and matrix formation, instead of inferring all these properties from porosity alone.

The primary report of functional arteries grown in vitro provides a motivating example of evaluating a constructed tissue by both mechanical and biological criteria.^[ref] As the cells add matrix and the starting material changes, the mature construct can differ substantially from its initial scaffold. Scaffold design and bioreactor design must consequently be assessed together: geometry affects transport, and the culture conditions affect the tissue that develops.