Aberration-corrected scanning transmission electron microscopy with annular dark-field imaging and spatially resolved EELS can locate the Si atoms and test their chemical environment. silicon scatters much more strongly to high angles than carbon, so an isolated Si impurity can stand out in a thin graphene lattice. Neighboring carbon positions reveal whether a site is, for example, three- or four-coordinated in projection.
Acquire a spectrum image at the same time. A silicon core-loss edge identifies the element, while its energy-loss near-edge structure contains information about the unoccupied states and bonding. This combination has experimentally distinguished individual Si coordination environments in graphene.[ref]
Direct Determination of the Chemical Bonding of Individual Impurities in Graphene by Wu Zhou and others. Figures 1–2, atomic-resolution imaging and Si-edge spectra
Advantages are atom-scale spatial localization, simultaneous structural and chemical evidence, and stronger chemical identification than brightness alone. Limitations include low counts at one atom, background subtraction, finite energy resolution, drift and the high dose needed for a useful spectrum. The beam can move or damage an impurity, and a two-dimensional projection does not by itself determine its out-of-plane geometry. Compare spectra and images with plausible structural calculations rather than assigning coordination solely from one bright pixel.