Macrocyclic effect 2026-10-20
zinc(II) should bind more strongly to 1. The macrocycle presents six amine donors that can chelate the dication in a roughly octahedral environment. Multiple donor contacts, the chelate effect and preorganization favour this binding. lithium is small and strongly prefers an appropriately sized oxygen-rich pocket; it gains less from this large nitrogen-donor cavity. Charge density alone is insufficient to rank the complexes: donor type, geometry, solvation and the strain of wrapping the host around each ion also matter.
The terminal ureidopyrimidinone groups supply the association sites. Their urea/pyrimidinone NH donors and carbonyl/ring-nitrogen acceptors can form a self-complementary array of four hydrogen bonds between two UPy units. Joining the two terminal units of one molecule by this noncovalent association closes the ring.
The ether-containing arms provide flexibility and spacing; they are not covalently joined together during ring formation. The ring is therefore a supramolecular conformation of the existing molecule, rather than a new covalent ether macrocycle.
Each imidazole already has one nitrogen substituted. Its remaining pyridine-like nitrogen attacks a benzylic carbon bearing chlorine in an reaction, expelling chloride and producing an imidazolium center. Repetition at the other end closes the ring. The expected product is therefore a dicationic bis-imidazolium macrocycle, in which two meta-xylylene bridges connect the two imidazolium rings. Both nitrogens of each imidazolium are alkylated; the aryl rings remain intact.
A compact way to specify its connectivity is to traverse the ring:Here each indicated imidazolium connects its two substituents through its two different ring nitrogen atoms, rather than through a single nitrogen.
chloride acts as an anion template: association with the positively charged intermediates and the inward-facing imidazolium CH donors brings the reacting ends together, favoring cyclization over intermolecular oligomerization. Tetrabutylammonium is a spectator counterion, not a covalent part of the product. The two substitutions produce two chloride counterions for the dication; template chloride can also occupy the cavity, with the remaining ions in solution. The schematic below specifies connectivity and charge without reproducing the source drawing.
