Macrocyclic effect 2026-10-20
Enhanced complex stability associated with donor sites being held in a macrocycle, relative to comparable open-chain ligands. The comparison depends on donor geometry, solvation and strain.
zinc(II) should bind more strongly to 1. The macrocycle presents six amine donors that can chelate the dication in a roughly octahedral environment. Multiple donor contacts, the chelate effect and preorganization favour this binding. lithium is small and strongly prefers an appropriately sized oxygen-rich pocket; it gains less from this large nitrogen-donor cavity. Charge density alone is insufficient to rank the complexes: donor type, geometry, solvation and the strain of wrapping the host around each ion also matter.
The terminal ureidopyrimidinone groups supply the association sites. Their urea/pyrimidinone NH donors and carbonyl/ring-nitrogen acceptors can form a self-complementary array of four hydrogen bonds between two UPy units. Joining the two terminal units of one molecule by this noncovalent association closes the ring.
The ether-containing arms provide flexibility and spacing; they are not covalently joined together during ring formation. The ring is therefore a supramolecular conformation of the existing molecule, rather than a new covalent ether macrocycle.
Each imidazole already has one nitrogen substituted. Its remaining pyridine-like nitrogen attacks a benzylic carbon bearing chlorine in an reaction, expelling chloride and producing an imidazolium center. Repetition at the other end closes the ring. The expected product is therefore a dicationic bis-imidazolium macrocycle, in which two meta-xylylene bridges connect the two imidazolium rings. Both nitrogens of each imidazolium are alkylated; the aryl rings remain intact.
A compact way to specify its connectivity is to traverse the ring:
Here each indicated imidazolium connects its two substituents through its two different ring nitrogen atoms, rather than through a single nitrogen.
chloride acts as an anion template: association with the positively charged intermediates and the inward-facing imidazolium CH donors brings the reacting ends together, favoring cyclization over intermolecular oligomerization. Tetrabutylammonium is a spectator counterion, not a covalent part of the product. The two substitutions produce two chloride counterions for the dication; template chloride can also occupy the cavity, with the remaining ions in solution. The schematic below specifies connectivity and charge without reproducing the source drawing.
Figure 1.
Connectivity of the chloride-templated bis-imidazolium macrocycle
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