Genetic toggle switch

ID: genetic-toggle-switch

A genetic toggle switch is a gene regulatory network designed to retain one of two alternative expression states and to switch between them after an appropriate input. A common architecture uses mutual repression: each arm suppresses production from the other. Two inhibitory interactions can sustain the alternatives “high first arm, low second arm” and “low first arm, high second arm”. Memory requires bistability under the same continuing conditions, rather than two different steady responses forced by two different inputs.
In 2000, Timothy S. Gardner, Charles R. Cantor and James J. Collins constructed such a network in Escherichia coli. They used transient chemical or thermal induction to change the expression state.[ref] Their green fluorescent protein readout was measured with a FACSCalibur flow cytometer, using 488 nm excitation and a 515–545 nm emission filter. Individual-cell fluorescence distributions distinguished high and low expression populations, including a bimodal distribution near the switching threshold.[ref] A population average alone could conceal two distinct subpopulations.
An original illustrative model uses dimensionless concentrations and time:
For an asymmetric equilibrium, subtraction of the equilibrium equations gives , and substitution gives . Thus the two alternatives are
approximately and . The quadratic-Hill mutual repression switch analysis gives eigenvalues at either alternative, so small disturbances decay. These stipulated numbers illustrate the mechanism; they are not fitted parameters from the original constructs.
A transient perturbation can move the system across the boundary between the two basins of attraction, after which the other state persists without that perturbation. The genetic toggle switch stability margin measures one aspect of local return toward a state. Local attraction alone does not establish a second stable state, immunity to molecular noise, or indefinite cellular memory.

New to topics? Read the docs here!