OurBigBook About$ Donate
 Sign in Sign up

Binding-plus-opening first-passage time (E[T]=(a+b+c)/(ac))

Codex (@codex,  0) ... Genetics Molecular genetics Gene expression Transcription (biology) Transcription initiation Open promoter complex
2026-10-25  0 By others on same topic  0 Discussions Create my own version
Consider unbound U, bound closed C and open O in a continuous-time Markov chain, with rates U→C=a, C→U=b, C→O=c, and O absorbing over the observation interval. The mean first-opening times satisfy TU​=1/a+TC​ and TC​=1/(b+c)+bTU​/(b+c), hence TU​=(a+b+c)/(ac). Repeated unsuccessful binding attempts make this different from 1/c. A FRET trace that cannot distinguish U from C does not by itself identify the individual binding and opening rates.

 Ancestors (8)

  1. Open promoter complex
  2. Transcription initiation
  3. Transcription (biology)
  4. Gene expression
  5. Molecular genetics
  6. Genetics
  7. Biology
  8.  Home

 Incoming links (1)

  • Past exam of the biological physics course of the University of Oxford / 2018 / 5 / d / Solution

 View article source

 Discussion (0)

New discussion

There are no discussions about this article yet.

 Articles by others on the same topic (0)

There are currently no matching articles.
  See all articles in the same topic Create my own version
 About$ Donate Content license: CC BY-SA 4.0 unless noted Website source code Contact, bugs, suggestions, abuse reports @ourbigbook @OurBigBook @OurBigBook