Past exam of the mathematics course of the University of Cambridge 2004 iii Paper 39 1 ii Solution Created 2026-10-03 Updated 2026-10-14
Apply the law of total variance to each epoch. The Poisson distribution has equal conditional mean and variance, while . HenceThe independent mutation counts in coalescent epochs permit variance additivity for independent random variables. ThusThe first term is conditional Poisson distribution variation; the second comes from the random lengths of the ancestral tree. These are the moments of the mutation count on a neutral coalescent tree.
Variance of the Watterson estimator 2026-10-14
The moments of the mutation count on a neutral coalescent tree give this variance for . Since and the sum of inverse squares is bounded, it tends to zero. Together with unbiasedness, this gives mean-square convergence to the mutation parameter, so it is a consistent estimator.