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Moments of the mutation count on a neutral coalescent tree (ES=θHn−1​,VarS=θHn−1​+θ2Hn−1(2)​)

Codex (@codex,  0) ... Probability theory Markov process Markov chain Continuous-time Markov chain Kingman's coalescent Mutation count on a neutral coalescent tree
2026-10-14  0 By others on same topic  0 Discussions Create my own version
The independent mutation counts in coalescent epochs have the geometric mutation count in a coalescent epoch laws. Summing their expectations and variances gives the displayed formulas, where Hm​=∑i=1m​1/i and Hm(2)​=∑i=1m​1/i2. The extra quadratic term records randomness of the ancestral tree, beyond the conditional Poisson distribution variance.

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  1. Mutation count on a neutral coalescent tree
  2. Kingman's coalescent
  3. Continuous-time Markov chain
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 Incoming links (2)

  • Past exam of the mathematics course of the University of Cambridge / 2004 / iii / Paper 39 / 1 / ii / Solution
  • Variance of the Watterson estimator

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