Thermal covariance of an elastic filament ($C(x,y)=k_{B}T{K}^{-1}(x,y)$)

For a positive quadratic bending operator $K$ with a real orthonormal basis of eigenfunctions, the equipartition theorem gives $C(x,y)=k_{B}T{\sum }_n{W}_n(x)W_n(y)/{\mu }_n$, where $K{W}_n={\mu }_n{W}_n$. This is the inverse-operator Green function multiplied by Boltzmann constant and temperature. Unconstrained zero-energy filament modes prevent a normalizable canonical ensemble, and negative modes signal an unstable quadratic model.

For both ends clamped and $K=A{\partial }_x^4$, the diagonal is $C(x,x)=k_{B}T{x}^3(L-x{)}^3/(3A{L}^3)$. This differs from a clamped-free tip variance. The center variance is $k_{B}T{L}^3/(192A)$.

A zero-energy mode lies in the kernel of the quadratic elastic filament operator. For pure bending, zero curvature makes the displacement affine. Free-free endpoints therefore leave translation and tilt modes, while slope-constrained, force-free endpoints leave only translation. Both clamped-clamped and hinged-hinged endpoints remove these modes. An unrestricted modal amplitude has constant Boltzmann distribution weight, so no normalizable canonical ensemble or finite displacement variance exists. Fixing the rigid degrees of freedom allows the equipartition theorem on the positive complement.