Molecular breeding is a set of advanced techniques used in plant and animal breeding that leverages molecular biology, genomics, and biotechnological tools to enhance the efficiency and accuracy of developing new varieties with desirable traits. It combines traditional breeding methods with molecular techniques to improve the selection process and accelerate the breeding cycle. Key components of molecular breeding include: 1. **Molecular Markers**: These are specific DNA sequences that are associated with particular traits (like disease resistance, drought tolerance, or yield).
Isopropyl β-D-1-thiogalactopyranoside (commonly abbreviated as IPTG) is a chemical compound that is widely used in molecular biology, particularly in the study of gene expression and protein production. It serves primarily as an inducer for the expression of genes controlled by the lac operon in bacterial systems, such as Escherichia coli (E. coli).
John M. Jumper is a prominent figure in the field of molecular biology, particularly known for his contributions to the study of protein structure and function. He is widely recognized for his work on protein folding and the development of computational methods to predict protein structures. His contributions have been influential in understanding the mechanisms of various biological processes and have paved the way for advancements in drug design and biotechnology.
Ligation-independent cloning (LIC) is a molecular biology technique used to insert DNA fragments into vectors without the need for traditional DNA ligation processes. This method simplifies the cloning process and enhances efficiency, especially for the construction of recombinant DNA. ### Key Features of Ligation-Independent Cloning: 1. **End Modification**: The DNA fragments intended for cloning are modified at their ends to create complementary overhangs or "sticky ends." This is often achieved via polymerase-mediated addition of specific sequences.
Loading control refers to a method used in various biological and biochemical experiments, particularly in the context of Western blotting, quantitative PCR, and other assays, to ensure that the amount of sample loaded onto a gel or a plate is consistent and appropriate for accurate comparisons and results. In Western blotting, for example, a loading control is a protein that is expressed at relatively constant levels in the samples being analyzed.
Micrococcal nuclease, also known as MCN or MNase, is an enzyme that is classified as a type of nuclease. It is produced by the bacteria *Staphylococcus aureus*. This enzyme is primarily known for its ability to cleave the phosphodiester bonds in nucleic acids, thereby breaking down DNA and RNA into smaller fragments.
Microscale thermophoresis (MST) is a biophysical technique used to study molecular interactions, particularly at the level of proteins, nucleic acids, and small molecules. It measures the movement of molecules in response to a temperature gradient, which is known as thermophoresis. The technique is particularly useful for analyzing binding interactions, thermodynamic properties, and conformational changes in biomolecules.
Microtubule-associated proteins (MAPs) are a diverse group of proteins that interact with microtubules, which are structural components of the cytoskeleton in eukaryotic cells. Microtubules are cylindrical structures made of tubulin protein dimers and play crucial roles in various cellular processes, including maintaining cell shape, enabling intracellular transport, and facilitating cell division.
Loop-mediated isothermal amplification (LAMP) is a nucleic acid amplification method used to rapidly and efficiently amplify specific DNA or RNA sequences. It is characterized by its simplicity and ability to operate at a constant temperature, typically between 60°C and 65°C, without the need for thermal cycling, which is required in traditional polymerase chain reaction (PCR) methods.
MAP-Seq, or Mappings of Active Promoters by Sequencing, is a method used in molecular biology and genomics to study gene expression and regulatory regions in the genome. The technique focuses on identifying and characterizing active promoters, which are crucial for the initiation of transcription and are key elements in understanding gene control mechanisms. The process generally involves several steps: 1. **Isolation of RNA**: The first step is to isolate RNA from cells or tissues of interest.
A paired-end tag (PET) is a feature used in DNA sequencing, particularly in next-generation sequencing (NGS) technologies. Paired-end sequencing involves reading from both ends of a DNA fragment, producing two reads (tags) from each fragment that are then used to generate data for genomic analysis.
MIQE stands for "Minimum Information for Quantitative Real-Time PCR Experiments." It is a set of guidelines designed to ensure that the reporting of quantitative real-time PCR (qPCR) experiments is thorough and consistent, thus improving the reliability, reproducibility, and transparency of research findings that utilize this technique.
mRNA display is a technique used in molecular biology and biotechnology to select and analyze peptides or proteins based on the genetic information encoded in mRNA. The method combines aspects of mRNA and protein interactions to create a powerful platform for discovering new proteins, understanding protein functions, and developing therapeutic agents. ### Key Features of mRNA Display: 1. **Encoding Proteins**: In mRNA display, a library of mRNA molecules is linked to their corresponding peptides or proteins.
Macromolecular assembly refers to the process by which large molecules, such as proteins, nucleic acids, or polysaccharides, come together to form higher-order structures. These assemblies are crucial for various biological functions and processes within living organisms.
Mitochondrial replacement therapy (MRT) is a reproductive technology designed to prevent the transmission of mitochondrial diseases from mother to child. Mitochondrial diseases are genetic disorders caused by mutations in the DNA of mitochondria, the energy-producing organelles in cells. These diseases can lead to a wide range of health issues, including muscular weakness, neurological problems, and organ dysfunction. MRT involves a process that replaces faulty mitochondria in a woman's eggs with healthy mitochondria from a donor.
The methylcitrate cycle is a biochemical pathway that plays a role in the metabolism of certain amino acids, particularly in some microorganisms and specific mammalian tissues. It is particularly important in the breakdown of odd-chain fatty acids and certain branched-chain amino acids, such as isoleucine, which are catabolized into propionyl-CoA.
A minigene is a simplified version of a gene that includes only the essential elements required for the study of gene regulation and function. Typically, a minigene consists of the coding sequence of a gene, along with minimal necessary regulatory elements, such as promoters and splice sites, that allow for proper transcription and splicing.
Minimotif Miner is a computational tool used primarily in bioinformatics for the identification and analysis of minimotifs—short sequences within proteins that can play crucial roles, such as binding sites for ligands, post-translational modification sites, or functional domains. These minimotifs are often of a length between 3 to 10 amino acids and may be critical for understanding protein function, interactions, and regulatory mechanisms.
Pinned article: Introduction to the OurBigBook Project
Welcome to the OurBigBook Project! Our goal is to create the perfect publishing platform for STEM subjects, and get university-level students to write the best free STEM tutorials ever.
Everyone is welcome to create an account and play with the site: ourbigbook.com/go/register. We belive that students themselves can write amazing tutorials, but teachers are welcome too. You can write about anything you want, it doesn't have to be STEM or even educational. Silly test content is very welcome and you won't be penalized in any way. Just keep it legal!
Intro to OurBigBook
. Source. We have two killer features:
- topics: topics group articles by different users with the same title, e.g. here is the topic for the "Fundamental Theorem of Calculus" ourbigbook.com/go/topic/fundamental-theorem-of-calculusArticles of different users are sorted by upvote within each article page. This feature is a bit like:
- a Wikipedia where each user can have their own version of each article
- a Q&A website like Stack Overflow, where multiple people can give their views on a given topic, and the best ones are sorted by upvote. Except you don't need to wait for someone to ask first, and any topic goes, no matter how narrow or broad
This feature makes it possible for readers to find better explanations of any topic created by other writers. And it allows writers to create an explanation in a place that readers might actually find it.Figure 1. Screenshot of the "Derivative" topic page. View it live at: ourbigbook.com/go/topic/derivativeVideo 2. OurBigBook Web topics demo. Source. - local editing: you can store all your personal knowledge base content locally in a plaintext markup format that can be edited locally and published either:This way you can be sure that even if OurBigBook.com were to go down one day (which we have no plans to do as it is quite cheap to host!), your content will still be perfectly readable as a static site.
- to OurBigBook.com to get awesome multi-user features like topics and likes
- as HTML files to a static website, which you can host yourself for free on many external providers like GitHub Pages, and remain in full control
Figure 2. You can publish local OurBigBook lightweight markup files to either OurBigBook.com or as a static website.Figure 3. Visual Studio Code extension installation.Figure 5. . You can also edit articles on the Web editor without installing anything locally. Video 3. Edit locally and publish demo. Source. This shows editing OurBigBook Markup and publishing it using the Visual Studio Code extension. - Infinitely deep tables of contents:
All our software is open source and hosted at: github.com/ourbigbook/ourbigbook
Further documentation can be found at: docs.ourbigbook.com
Feel free to reach our to us for any help or suggestions: docs.ourbigbook.com/#contact