Production and regulation of functional RNAs and proteins from the chloroplast genome. The location of the regulated process and the genomic origin of its regulator are different properties.
A nuclear-encoded plastid factor implicated in coordination of plastid state with nuclear gene expression. It should not be identified with every exported plastid stress signal.[ref]
Regulation of nuclear gene expression in response to the state of an organelle. The identity and route of a signal require experimental evidence beyond correlation of nuclear and organellar changes.
Regulation directed from the nuclear system toward an organelle, including control of imported regulators. It contrasts with retrograde signaling in direction, not necessarily in timescale.
A nuclear-specified plastid RNA polymerase of the phage-type family, with promoter preferences distinct from plastid-encoded RNA polymerase.
A bacterial-type plastid RNA polymerase with core subunits encoded by the plastid genome. Nuclear-encoded sigma factors and associated components mean that its name does not imply autonomous regulation.
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