The gap is not a fixed mechanical separation. Thermal fluctuations of the wall compete with drift towards the microtubule under the opposing force. A monomer can be incorporated only after the gap reaches its length. The Smoluchowski equation describes this overdamped drift and diffusion of gap probability density.
For gap potential energy , the equation and its probability current areThe drift mobility is , the overdamped consequence of the fluctuation-dissipation relation for a Langevin particle. Equivalently, this coefficient is fixed by requiring the zero-current solution to be the Boltzmann distribution . Solve this equation with the appropriate exclusion, incorporation and probability-normalization conditions. The steady flux through the incorporation threshold gives the addition rate ; the elongation speed is .
There is a regime distinction in the printed problem. The absorbing boundary imposed in part (c) means instantaneous incorporation once a gap opens, and leads to the diffusion-limited Brownian ratchet with constant load. A genuinely reaction-limited polymerization Brownian ratchet instead assumes fast gap equilibration followed by a finite chemical addition rate, giving an exponential gating factor multiplying that chemical rate. The equations requested in the subsequent parts specify the former model, which is the one solved here.
Each addition starts a new statistically identical waiting episode at zero gap. Thus the addition rate is the reciprocal of a mean first-passage time, not the reciprocal of the mean gap:This can also be derived without the steady density. If is the mean time to reach starting at gap , its backward Smoluchowski equation isThe first boundary is reflecting and the second absorbing. An integrating factor gives , whenceAt weak force, is the time for a freely diffusing wall to move a monomer length, with reflection at the tip. At strong force, opening the gap requires work , with Boltzmann distribution suppression . The drift establishes a near-tip thermal length and a diffusion time ; consequentlyThe exponentially long wait explains why the growth slows. There is no additional chemical waiting time in the imposed absorbing-threshold model; such a time would be needed to describe the separate reaction-limited polymerization Brownian ratchet regime.