Academic publishing Updated 2025-07-16
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AC Josephson effect Updated 2025-07-16
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This is what happens when you apply a DC voltage across a Josephson junction.
It is called "AC effect" because when we apply a DC voltage, it produces an alternating current on the device.
By looking at the Josephson equations, we see that a positive constant, then just increases linearly without bound.
Therefore, from the first equation:
(1)
we see that the current will just vary sinusoidally between .
This meas that we can use a Josephson junction as a perfect voltage to frequency converter.
Wikipedia mentions that this frequency is , so it is very very high, so we are not able to view individual points of the sine curve separately with our instruments.
Also it is likely not going to be very useful for many practical applications in this mode.
Figure 1.
I-V curve of the AC Josephson effect
. Source.
Voltage is horizontal, current vertical. The vertical bar in the middle is the effect of interest: the current is going up and down very quickly between , the Josephson current of the device. Because it is too quick for the oscilloscope, we just see a solid vertical bar.
The non vertical curves at right and left are just other effects we are not interested in.
TODO what does it mean that there is no line at all near the central vertical line? What happens at those voltages?
Video 1.
Superconducting Transition of Josephson junction by Christina Wicker (2016)
Source. Amazing video that presumably shows the screen of a digital oscilloscope doing a voltage sweep as temperature is reduced and superconductivity is reached.
Figure 2.
I-V curve of a superconducting tunnel junction
. So it appears that there is a zero current between and . Why doesn't it show up on the oscilloscope sweeps, e.g. Video 1. "Superconducting Transition of Josephson junction by Christina Wicker (2016)"?
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Animal intelligence Updated 2025-07-16
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São Paulo (state) Updated 2025-07-16
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activatedgeek/LeNet-5 Updated 2025-07-16
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This repository contains a very clean minimal PyTorch implementation of LeNet-5 for MNIST.
It trains the LeNet-5 neural network on the MNIST dataset from scratch, and afterwards you can give it newly hand-written digits 0 to 9 and it will hopefully recognize the digit for you.
Ciro Santilli created a small fork of this repo at lenet adding better automation for:
Install on Ubuntu 24.10 with:
sudo apt install protobuf-compiler
git clone https://github.com/activatedgeek/LeNet-5
cd LeNet-5
git checkout 95b55a838f9d90536fd3b303cede12cf8b5da47f
virtualenv -p python3 .venv
. .venv/bin/activate
pip install \
  Pillow==6.2.0 \
  numpy==1.24.2 \
  onnx==1.13.1 \
  torch==2.0.0 \
  torchvision==0.15.1 \
  visdom==0.2.4 \
;
We use our own pip install because their requirements.txt uses >= instead of == making it random if things will work or not.
On Ubuntu 22.10 it was instead:
pip install
  Pillow==6.2.0 \
  numpy==1.26.4 \
  onnx==1.17.0 torch==2.6.0 \
  torchvision==0.21.0 \
  visdom==0.2.4 \
;
Then run with:
python run.py
This script:
  • does a fixed 15 epochs on the training data
  • it then uses the trained net from memory to check accuracy with the test data
  • then it also produces a lenet.onnx ONNX file which contains the trained network, nice!
It throws a billion exceptions because we didn't start the Visdom server, but everything works nevertheless, we just don't get a visualization of the training.
The terminal outputs lines such as:
Train - Epoch 1, Batch: 0, Loss: 2.311587
Train - Epoch 1, Batch: 10, Loss: 2.067062
Train - Epoch 1, Batch: 20, Loss: 0.959845
...
Train - Epoch 1, Batch: 230, Loss: 0.071796
Test Avg. Loss: 0.000112, Accuracy: 0.967500
...
Train - Epoch 15, Batch: 230, Loss: 0.010040
Test Avg. Loss: 0.000038, Accuracy: 0.989300
And the runtime on Ubuntu 22.10, P51 was:
real    2m10.262s
user    11m9.771s
sys     0m26.368s
One of the benefits of the ONNX output is that we can nicely visualize the neural network on Netron:
Figure 1.
Netron visualization of the activatedgeek/LeNet-5 ONNX output
. From this we can see the bifurcation on the computational graph as done in the code at:
output = self.c1(img)
x = self.c2_1(output)
output = self.c2_2(output)
output += x
output = self.c3(output)
This doesn't seem to conform to the original LeNet-5 however?
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Amazon Web Services Updated 2025-07-16
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Cool data embedded in the Bitcoin blockchain / Early AtomSea & EMBII uploads Updated 2025-07-16
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These are of course likely all made by AtomSea & EMBII themselves while developing/testing their upload system.
They are also artsy peoeple themselves, and as pointed at twitter.com/AllenVandever/status/1563964396656812034 what they were doing was basicaly non-fungible token art, which became much much more popular a few years later around 2021.
The first upload that we could find at github.com/cirosantilli/bitcoin-inscription-indexer/tree/3f53e152ec9bb0d070dbcb8f9249d92f89effa70#atomsea-index was tx 44e80475dc363de2c7ee17b286f8cd49eb146165a79968a62c1c2c4cf80772c9 on block 272573 (2013-12-01) but it does not show on Bitfossil: bitfossil.org/44e80475dc363de2c7ee17b286f8cd49eb146165a79968a62c1c2c4cf80772c9/. This is was due to an upload bug explained by the following entry. By looking at the ASCII data at github.com/cirosantilli/bitcoin-inscription-indexer/blob/master/data/out/0272.txt#L449 that this is meant to contain the same content as the following message: a quote from the Bhagavad Gita, so this is definitely a bugged version of the following one.
The next one is tx c9d1363ea517cd463950f83168ce8242ef917d99cd6518995bd1af927d335828 block 272577 (2013-12-02). It actually shows on bifossil and it reads:
I WONDER WHAT HISTORY WILL THINK ABOUT THESE FIRST FEW BUGS...HA HA HA. NOBODY IS PERFECT.
followed by:
He who regards
With an eye that is equal
Friends and comrades,
The foe and the kinsman,
The vile, the wicked,
The men who judge him,
And those who belong
To neither faction:
He is the greatest.
The bug message is definitely a reference to the previous non-visible bugged upload bitfossil.org/4b72a223007eab8a951d43edc171befeabc7b5dca4213770c88e09ba5b936e17/, TODO understand exactly how they fucked up. This illustrates the beauty of the blockchain very well: unlike with version control, you don't just see selected snapshots: you see actual debug logs!!!
Figure 1.
WeAreStarStuff.jpg
. Source.
The third AtomSea & EMBII upload, and the first actual image.
Message:
Photo etchin' test. #AtomSea #embii (photo by Travis Ehrich)
The image shows showingAtomSea and EMBII together, presumably photographed by this dude.
The filename is of course a reference to the quote/idea: We Are Made of Star-Stuff that was much popularized by Carl Sagan.
bitfossil.org/fac0b9a4f90414710b806fd286e020aea2404498946845ef3783f305dd4cd3a7 (2024-01-13) contains a cropped version with only AtomSea persent.
Figure 2.
HugPuddle.jpg
. Source.
The fourth AtomSea & EMBII upload, and the second image. Message:
HugPuddle Testing Apertus Disk Drive
And then finally we meet Chiharu, EMBII's partner, with her hair painted blond (she's Japanese): ILoveYouMore.jpg.
Then there's an approximation of pi as ASCII decimal fraction on tx 70fd289901bae0409f27237506c330588d917716944c6359a8711b0ad6b4ce76 from block 273522 (2013-12-07):
3.1415926535897932384626433832795028841971693993751058209749445923078164062862089986280348253421170679821480865132823066470938446095505822317253594081284811174502841027019385211055596446229489549303819644288109756659334461284756482337867831652712019091456485669234603486104543266482133936072602491412737245870066063155881748815209209628292540917153643678925903600113305305488204665213841469519415116094330572703657595919530921861173819326117931051185480744623799627495673518857527248912279381830119491298336733624406566430860213949463952247371907021798609437027705392171762931767523846748184676694051320005681271452635608277857713427577896091736371787214684409012249534301465495853710507922796892589235420199561121290219608640344181598136297747713099605187072113499999983729780499510597317328160963185950244594553469083026425223082533446850352619311881710100031378387528865875332083814206171776691473035982534904287554687311595628638823537875937519577818577805321712268066130019278766111959092164201989
tx b8b9f50a354166c46b69ecd47a0fbd20ee78c3471d2557bf275aff1b4cf4752d (2013-12-07) on bitfossil.org) contains Where the Sidewalk Ends by Shel Silverstein:
There is a place where the sidewalk ends
And before the street begins,
And there the grass grows soft and white,
And there the sun burns crimson bright,
And there the moon-bird rests from his flight
To cool in the peppermint wind.
Let us leave this place where the smoke blows black
And the dark street winds and bends.
Past the pits where the asphalt flowers grow
We shall walk with a walk that is measured and slow,
And watch where the chalk-white arrowls go
To the place where the sidewalk ends.
Yes we'll walk with a walk that is measured and slow,
And we'll go where the chalk-white arrows go,
For the children, they mark, and the children, they know
The place where the sidewalk ends.
bitfossil.org/73ca50321147bac9010bec43d63f7f76857fe9ede240cc89710e28723fdb242f/ (2013-12-14) has message:
MULTIFILE SUPPORT TEST
and links to 3 .txt files 1.txt, 2.txt, 3.txt containing single characters 1, 2, and 3.
Figure 3.
CompressedLogo.png
. Source.
2013-12-20. Message:
Colby Nelson and myself burnt the midnight oils designing the APERTUS imagery last night....
Thanks Colby for all your help.
Possibly www.linkedin.com/in/colby-nelson-59b538207/.
Contains an Apertus logo which is used on bitfossil.org/ itself, presumably they were designing that logo.
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Cool data embedded in the Bitcoin blockchain / Force of Will Updated 2025-07-16
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ASCII art of a Force of Will, a famous and powerful Magic: The Gathering card first printed in 1996.
This is Ciro Santilli's personal favorite ASCII art he has found in the blockchain so far. Also Ciro could not find any other previous source of this, so there is some chance it is original. One can dream.
The choice of card is probably linked to the function of the card in the game of Magic: The Gathering. This card essentially prevents the opponent from casting a spell they are about to cast. The presumed intended meaning of this art is further accentuated by the old card type term "interrupt" (late renamed to "instant"), which suggests that "this ASCII art is an interruption to the normal monetary transactions of the blockchain".
One of also reminded of the prayer wars interruption attempts. We could not however identify anything specific that this ASCII art might have tried to interrupt besides the normal flow of monetary transactions.
If one goes full art critic mode, it is also tempting to draw a parallel between the card's "You may pay 1 life" alternative casting cost (as opposed to 5 mana, 3 and two blue, which is a very large cost for most games) as being a reference to the money spent by the uploader of the art to upload it.
TODO understand exactly how it was encoded and why it is so weird. The UUUU has a slightly weird encoding which we fixed by hand here TODO understand.
 -------------------------------------
|  Force of Will               3 U U  |
|  ---------------------------------  |
| |                  ////////////   | |
| |                ////() ()\////\  | |
| |               ///_\ (--) \///\  | |
| |        )      ////  \_____///\\ | |
| |       ) \      /   /   /    /   | |
| |    ) /   \     |   |  /   _/    | |
| |   ) \  (  (   /   / /   / \     | |
| |  / ) ( )  / (    )/(    )  \    | |
| |  \(_)/(_)/  /UUUU \  \\\/   |   | |
| .---------------------------------. |
| Interrupt                           |
| ,---------------------------------, |
| | You may pay 1 life and remove a | |
| | blue card in your hand from the | |
| | game instead of paying Force of | |
| | Will's casting cost.  Effects   | |
| | that prevent or redirect damage | |
| | cannot be used to counter this  | |
| | loss of life.                   | |
| | Counter target spell.           | |
| `---------------------------------` |
|                                     l
| Illus.  Terese Nelsen               |
 -------------------------------------
Figure 1.
Force of Will Magic: The Gathering card (Alliances)
Source. A high resolution scan of the original card depicted in the ASCII art for comparison.
The following two ASCII transactions:
tx 0f05c47a8caafadecc10d70ba3bf010eaf6bb416b5e1ad7b01cf3445f5fb7a1c
I am. Therefore, I have come to be.

-- Hyena


tx e6d48f6912929a58a2ee30c13768058777d8547215c27109b5cb0724e7abaaba
Erich,
Bro, this looks excellent!!
-Duriel
suggest this ASCII art might have been uploaded by Figure "Erich Erstu", AKA Hyena, creator of cryptograffiti.info, a service which would have allowed uploading ASCII content to the blockchain.
The only other mention of "Duriel" in the blockchain is tx 140562ceb42fc8943fa52ccc0ddbb11ca2d88dae9b5240d7a4b46864538c515a which has some freedom of speech comments and gives the email:
Duriel@paystamper.com = 1HcuhfTAiQCt6KdMG2rZLXsTcKYj9nLDhS
paystamper.com was some other blockchain service from circa 2015:
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Cool data embedded in the Bitcoin blockchain / Marijuana plant Updated 2025-07-16
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j(-> 1EGa1izEFDHzEobDDQny73re9BwXdzhZvH <-
j(                 ,
j(                dM
j(                MMr
j(               4MMML                  .
j(               MMMMM.                xf
j(              "M6MMM               .MM-
j( h..          +MM5MMM            .MMMM
j( .MM.         .MMMMML.          MMMMMh
j( )MMMh.        MM5MMM         MMMMMMM
j(  3MMMMx.     'MMM3MMf      xnMMMMMM"
j(  '*MMMMM      MMMMMM.     nMMMMMMP"
j(    *MMMMMx    "MMM5M\    .MMMMMMM=
j(     *MMMMMh   "MMMMM"   JMMMMMMP
j(       MMMMMM   GMMMM.  dMMMMMM
j(        MMMMMM  "MMMM  .MMMMM(        .n
j(         *MMMMx  MMM"  dMMMM"    .nnMMMM
j(Mn...     'MMMMr 'MM   MMM"   .nMMMMMMM*
j(4MMMMnn..   *MMM  MM  MMP"  .dMMMMMMM""
j( ^MMMMMMMMx.  *ML "M .M*  .MMMMMM**"
j(    *PMMMMMMhn. *x > M  .MMMM**""
j(       ""**MMMMhx/.h/ .=*"
j(                .3P"%....
j(              nP"     "*MMnx
The transaction before the ASCII art tx 9b08c00ced2bca4525d74e82db9af2aec8ef213eb1c1bf68a48b6be929968332 starts with what is likely a "Legalize" and must be a Tor Onion service:
j(-> 1EGa1izEFDHzEobDDQny73re9BwXdzhZvH <-
but that address as is + .onion is invalid, TODO find the correct one.
Other marijuana plants can be found contained entirely in single transactions:
tx d338da06d13a21a296506c0c8cd8c8533ba8fa076ff5c2c1fd02a457aac3ef77 via cryptograffiti.info contains a marihuana plant followed by a complaint:
[ mirrored by http://dmabraham.info/ | moarrr ]
[ CryptoGraffiti: Donate BTC: 1MVpQJA7FtcDrwKC6zATkZvZcxqma4JixS ]
[ Latest News: EU/Greece chaos due to huge debts! ]
[ Bless! ]

{ Supa - https://bitcoin-otc.com/viewratingdetail.php?nick=supa }
William Robert Girdlestone
1535 Dingwall RD Apt 35
Courtenay
British Columbia
Canada
V9N 3S8

( https://bitcointalk.org/index.php?topic=575743.0 )
[ One of the lowest rated #bitcoin-otc users, owing me at least 10 BTC ]
[ Most likely much more with compounding interesting, but its all ]
[ written off as a huge loss to me. Never again deal with him! ]
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Massachusetts Updated 2025-07-16
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Stephen Hawking Updated 2025-07-16
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While learning black-hole stuff is not on top of Ciro Santilli's priorities, Hawking's spirit is to be admired.
To never give up even when everything seems lost, and still have a sense of humour is respectable.
An ex-physicist colleague who had met Hawking told an anecdote. Hawking was around in the department one day, they said hi and all. But then Hawking wanted to tell a joke. It took like 5 minutes of typing, and you can imagine that things were pretty awkward and the joke's timing was "a bit off". But Hawking did tell the joke nonetheless.
This is also suggested in the The Theory of Everything (2014) film, and therefore likely the biographies.
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x86 Paging Tutorial / Play with physical addresses in Linux Updated 2025-07-16
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Analects Updated 2025-07-16
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Analytical method to solve a partial differential equation Updated 2025-07-16
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Andy Stapleton Updated 2025-07-16
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Subdepartment of the Department of Physics of the University of Oxford Updated 2025-07-16
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E. Coli Whole Cell Model by Covert Lab / Output overview Updated 2025-07-16
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Run output is placed under out/:
Some of the output data is stored as .cpickle files. To observe those files, you need the original Python classes, and therefore you have to be inside Docker, from the host it won't work.
We can list all the plots that have been produced under out/ with
find -name '*.png'
Plots are also available in SVG and PDF formats, e.g.:
  • PNG: ./out/manual/plotOut/low_res_plots/massFractionSummary.png
  • SVG: ./out/manual/plotOut/svg_plots/massFractionSummary.svg The SVGs write text as polygons, see also: SVG fonts.
  • PDF: ./out/manual/plotOut/massFractionSummary.pdf
The output directory has a hierarchical structure of type:
./out/manual/wildtype_000000/000000/generation_000000/000000/
where:
  • wildtype_000000: variant conditions. wildtype is a human readable label, and 000000 is an index amongst the possible wildtype conditions. For example, we can have different simulations with different nutrients, or different DNA sequences. An example of this is shown at run variants.
  • 000000: initial random seed for the initial cell, likely fed to NumPy's np.random.seed
  • genereation_000000: this will increase with generations if we simulate multiple cells, which is supported by the model
  • 000000: this will presumably contain the cell index within a generation
We also understand that some of the top level directories contain summaries over all cells, e.g. the massFractionSummary.pdf plot exists at several levels of the hierarchy:
./out/manual/plotOut/massFractionSummary.pdf
./out/manual/wildtype_000000/plotOut/massFractionSummary.pdf
./out/manual/wildtype_000000/000000/plotOut/massFractionSummary.pdf
./out/manual/wildtype_000000/000000/generation_000000/000000/plotOut/massFractionSummary.pdf
Each of thoes four levels of plotOut is generated by a different one of the analysis scripts:
  • ./out/manual/plotOut: generated by python runscripts/manual/analysisVariant.py. Contains comparisons of different variant conditions. We confirm this by looking at the results of run variants.
  • ./out/manual/wildtype_000000/plotOut: generated by python runscripts/manual/analysisCohort.py --variant_index 0. TODO not sure how to differentiate between two different labels e.g. wildtype_000000 and somethingElse_000000. If -v is not given, a it just picks the first one alphabetically. TODO not sure how to automatically generate all of those plots without inspecting the directories.
  • ./out/manual/wildtype_000000/000000/plotOut: generated by python runscripts/manual/analysisMultigen.py --variant_index 0 --seed 0
  • ./out/manual/wildtype_000000/000000/generation_000000/000000/plotOut: generated by python runscripts/manual/analysisSingle.py --variant_index 0 --seed 0 --generation 0 --daughter 0. Contains information about a single specific cell.
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Mainframe computer Updated 2025-07-16
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Mao Zedong Updated 2025-07-16
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Maser Updated 2025-07-16
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Video 1.
Principles of the Optical Maser by Bell Labs
. Source. Date: 1963.
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