Mammalian-wide interspersed repeats (MIRs) are a class of genetic elements found in the genomes of mammals. They are a type of transposable element, specifically classified as short interspersed nuclear elements (SINEs). MIRs are thought to have originated from retrotransposition events and are characterized by their relatively short length, typically ranging from about 100 to 300 base pairs.
The term "Min System" could refer to various concepts depending on the context, as it is not a widely established term on its own. Here are a few possibilities: 1. **Minimum System in Control Theory**: In control theory, a "min system" might refer to systems characterized by simple dynamics or minimal states necessary to achieve a certain behavior or performance. This can include state-space representations that are reduced to their essential elements.
Molecular modeling is a computational technique used to represent and analyze the structure, properties, and behavior of molecules. It leverages a variety of computational methods and simulations to visualize molecular interactions and predict the effects of changes in molecular structure. Here are some key aspects of molecular modeling: 1. **Structural Representation**: Molecular modeling enables the construction of models for molecules, including atoms, bonds, and spatial arrangements.
A molecular probe is a chemical species that can bind to a specific target molecule to help identify, quantify, or visualize it. These probes are commonly used in various fields such as molecular biology, biochemistry, and medical diagnostics. There are several types of molecular probes, including: 1. **Fluorescent Probes**: These probes emit light when excited by specific wavelengths and are used to label molecules in live cells or tissues for imaging purposes.
NdeI is a type of restriction enzyme, which is a protein that can cut DNA at specific sites. It is a type II restriction endonuclease, meaning it recognizes a specific sequence of nucleotides in the DNA and cleaves it at that location. The recognition sequence for NdeI is 5'-CATATG-3', and it typically cuts between the C and A, producing sticky ends.
NlaIII is a restriction enzyme, which is an endonuclease that recognizes specific nucleotide sequences in DNA and cleaves the DNA at or near these sites. Specifically, NlaIII recognizes the palindromic sequence "G***C" and cuts between the G and C nucleotides, yielding specific DNA fragments. Restriction enzymes like NlaIII are widely used in molecular biology for cloning, DNA manipulation, and various genetic engineering applications.
Nucleofection is a specialized technique used to introduce nucleic acids (DNA or RNA) into cells by utilizing an electrical field to facilitate the uptake of the genetic material. This method is particularly effective for difficult-to-transfect cell types that are less amenable to traditional transfection methods, such as lipofection or viral transduction.
A nucleotide is the basic building block of nucleic acids, which are essential molecules in living organisms. Nucleotides serve as the monomers that link together to form DNA (deoxyribonucleic acid) and RNA (ribonucleic acid).
PUC19 stands for the Pre-University Course (PUC) examination held in 2019 in certain Indian states, primarily Karnataka. It represents the final examination for students who have completed two years of pre-university education, typically after finishing their secondary school (10th grade). The PUC system is often a stepping stone for students moving on to undergraduate programs.
The Pho regulon is a set of genes in bacteria, particularly in *Escherichia coli* (E. coli) and other Gram-negative bacteria, that are regulated in response to phosphate availability. It plays a crucial role in how bacteria adapt to low phosphate conditions, which can be critical for their survival and growth in various environments. When phosphate levels are low, the Pho regulon is activated, leading to the transcription of genes involved in phosphate acquisition, transport, and metabolism.
Plaque hybridization is a molecular biology technique used to detect specific DNA or RNA sequences within a mixture of nucleic acids. It is particularly useful for identifying specific genes, analyzing gene expression, or isolating cloned DNA fragments. Here’s a brief overview of the process: 1. **Preparation of a Plaque**: In this context, plaques usually refer to areas of bacterial lysis on a lawn of host bacteria when a bacteriophage (virus that infects bacteria) is present.
SNPlex is a technology developed for the analysis of single nucleotide polymorphisms (SNPs), which are variations in a single nucleotide that occur at specific positions in the genome. SNPlex is a multiplexed genotyping assay, meaning it allows for the simultaneous analysis of multiple SNPs in a single experiment. This enables researchers to efficiently study genetic variations across large samples, which can be useful in various fields such as genetics, pharmacogenomics, and personalized medicine.
Post-transcriptional modification refers to the various processes that modify RNA molecules after they have been synthesized from DNA but before they are translated into proteins. These modifications are crucial for the proper functioning of RNA and include several key processes: 1. **Capping**: In eukaryotic cells, the 5' end of the newly synthesized messenger RNA (mRNA) molecule is modified by the addition of a 7-methylguanylate cap.
Protein mimetics are synthetic compounds designed to imitate the structure or function of biological proteins. These compounds can mimic the properties of proteins in terms of their ability to interact with biological molecules, catalyze reactions, or perform various biological functions. Protein mimetics are used in various applications, including: 1. **Drug Development**: They can serve as potential therapeutic agents by mimicking the action of proteins involved in disease processes.
PstI is a restriction enzyme that is widely used in molecular biology for the purpose of cutting DNA at specific sites. It is classified as a Type II restriction endonuclease, meaning it recognizes specific palindromic DNA sequences and cleaves the DNA at or near these sites.
R.EcoRII, more commonly known as EcoRII, is a type II restriction enzyme isolated from the bacterium *Escherichia coli* strain RY13 (the source of the enzyme's name). Restriction enzymes are proteins that recognize specific sequences of nucleotides in DNA and cleave the DNA at or close to these sites.
A reading frame is a way to divide a sequence of nucleotides in DNA or RNA into consecutive, non-overlapping triplets, known as codons. The reading frame determines how the sequence is translated into amino acids during protein synthesis. Because the genetic code is read in sets of three nucleotides, a shift in the reading frame can lead to completely different translations of the same nucleotide sequence.
Recombinase is an enzyme that facilitates the process of recombination, which involves the rearrangement of genetic material, especially DNA. This process is crucial in several biological contexts, including: 1. **Genetic Diversity**: In sexual reproduction, recombinases play a key role in the exchange of genetic material between homologous chromosomes during meiosis, contributing to genetic diversity in offspring.
A reporter gene is a gene that researchers use to study the activity of other genes or regulatory sequences. It is typically a gene that encodes a protein producing an easily measurable signal, such as fluorescence or color change, which can be quantitated. Reporter genes are often used in molecular biology and genetics to monitor gene expression, track cellular processes, or evaluate the efficacy of different treatments.

Pinned article: Introduction to the OurBigBook Project

Welcome to the OurBigBook Project! Our goal is to create the perfect publishing platform for STEM subjects, and get university-level students to write the best free STEM tutorials ever.
Everyone is welcome to create an account and play with the site: ourbigbook.com/go/register. We belive that students themselves can write amazing tutorials, but teachers are welcome too. You can write about anything you want, it doesn't have to be STEM or even educational. Silly test content is very welcome and you won't be penalized in any way. Just keep it legal!
We have two killer features:
  1. topics: topics group articles by different users with the same title, e.g. here is the topic for the "Fundamental Theorem of Calculus" ourbigbook.com/go/topic/fundamental-theorem-of-calculus
    Articles of different users are sorted by upvote within each article page. This feature is a bit like:
    • a Wikipedia where each user can have their own version of each article
    • a Q&A website like Stack Overflow, where multiple people can give their views on a given topic, and the best ones are sorted by upvote. Except you don't need to wait for someone to ask first, and any topic goes, no matter how narrow or broad
    This feature makes it possible for readers to find better explanations of any topic created by other writers. And it allows writers to create an explanation in a place that readers might actually find it.
    Figure 1.
    Screenshot of the "Derivative" topic page
    . View it live at: ourbigbook.com/go/topic/derivative
  2. local editing: you can store all your personal knowledge base content locally in a plaintext markup format that can be edited locally and published either:
    This way you can be sure that even if OurBigBook.com were to go down one day (which we have no plans to do as it is quite cheap to host!), your content will still be perfectly readable as a static site.
    Figure 5. . You can also edit articles on the Web editor without installing anything locally.
    Video 3.
    Edit locally and publish demo
    . Source. This shows editing OurBigBook Markup and publishing it using the Visual Studio Code extension.
  3. https://raw.githubusercontent.com/ourbigbook/ourbigbook-media/master/feature/x/hilbert-space-arrow.png
  4. Infinitely deep tables of contents:
    Figure 6.
    Dynamic article tree with infinitely deep table of contents
    .
    Descendant pages can also show up as toplevel e.g.: ourbigbook.com/cirosantilli/chordate-subclade
All our software is open source and hosted at: github.com/ourbigbook/ourbigbook
Further documentation can be found at: docs.ourbigbook.com
Feel free to reach our to us for any help or suggestions: docs.ourbigbook.com/#contact