Particle decay by Ciro Santilli 35 Updated +Created
Can produce two entangled particles.
Microsoft Quantum by Ciro Santilli 35 Updated +Created
qflow by Ciro Santilli 35 Updated +Created
They apparently even produced a real working small RISC-V chip with the flow, not bad.
MDPI by Ciro Santilli 35 Updated +Created
Uracil by Ciro Santilli 35 Updated +Created
Los Alamos National Laboratory by Ciro Santilli 35 Updated +Created
Historian Alan B. Carr:
Mario Kart 64 by Ciro Santilli 35 Updated +Created
Ciro Santilli really liked the battle mode on this.
Mycoplasma genitalium by Ciro Santilli 35 Updated +Created
Size: 300 x 600 nm
Has one of the smallest genomes known, and JCVI made a minimized strain with 473 genes: JCVI-syn3.0.
The reason why genitalium has such a small genome is that parasites tend to have smaller DNAs. So it must be highlighted that genitalium can only survive in highly enriched environments, it can't even make its own amino acids, which it normally obtains fromthe host cells! And because it cannot do cellular respiration, it very likely replicates slower than say E. Coli. It's easy to be small in such scenarios!
Power, Sex, Suicide by Nick Lane (2006) section "How to lose the cell wall without dying" page 184 has some related mentions puts it well very:
One group, the Mycoplasma, comprises mostly parasites, many of which live inside other cells. Mycoplasma cells are tiny, with very small genomes. M. genitalium, discovered in 1981, has the smallest known genome of any bacterial cell, encoding fewer than  genes. Despite its simplicity, it ranks among the most common of sexually transmitted diseases, producing symptoms similar to Chlamydia infection. It is so small (less than a third of a micron in diameter, or an order of magnitude smaller than most bacteria) that it must normally be viewed under the electron microscope; and difficulties culturing it meant its significance was not appreciated until the important advances in gene sequencing in the early 1990s. Like Rickettsia, Mycoplasma have lost virtually all the genes required for making nucleotides, amino acids, and so forth. Unlike Rickettsia, however, Mycoplasma have also lost all the genes for oxygen respiration, or indeed any other form of membrane respiration: they have no cytochromes, and so must rely on fermentation for energy.
Downsides mentioned at youtu.be/PSDd3oHj548?t=293:
  • too small to see on light microscope
  • difficult to genetically manipulate. TODO why?
  • less literature than E. Coli.
Data:
Software developer collective by Ciro Santilli 35 Updated +Created
This model can work well when there is a set of commonly used libraries that some developers often use together, but such that there isn't enough maintenance work for each one individually.
So what people do is to create a group that maintains all those projects, to try and get enough money to survive from the contributions done primarily for each one individually.
Eukaryote without mitochondria by Ciro Santilli 35 Updated +Created
pubmed.ncbi.nlm.nih.gov/27185558/ A Eukaryote without a Mitochondrial Organelle by Karnkowska et. al (2016)
Power, Sex, Suicide by Nick Lane (2006) by Ciro Santilli 35 Updated +Created
All pages below are from the second edition from 2018. It seems that there weren't any changes in the text, the updated preface mentions
As it happens, nearly 15 years have passed since the 1st edition of Power, Sex, Suicide was published, and I am resisting the temptation to make any lame revisions. Some say that even Darwin lessened the power of his arguments in the Origin of Species through his multiple revisions, in which he dealt with criticisms and sometimes shifted his views in the wrong direction. I prefer my original to speak for itself, even if it turns out to be wrong.
This is partly addressed in the preface of the second edition from 2018.
Central thesis:
Smaller points:
Nitpicks:
  • the book calls ATP synthase "ATPase" in several points, which is confusing because -ase means "something that breaks", and in 2020 parlance, there are ATPases which actually break ATP: en.wikipedia.org/wiki/ATPase. The book itself acknowledges that on page 135:
    The ATPase is freely reversible. Under some circumstances it can go into reverse, whereupon it splits ATP, and uses the energy released to pump protons up the drive shaft, back across the membrane against the pressure of the reservoir. In fact the very name ATPase (rather than ATP synthase) signifies this action, which was discovered first. This bizarre trait hides a deep secret of life, and we’ll return to it in a moment.
Some criticisms:
  • some of the later chapters are a bit more boring, like the stuff about warm-blooded animals. Perhaps is it that Ciro Santilli is more interested in the molecular aspects than macro
  • the author talks about some very recent research at the time. While this does highlight his expertise, some of the points mentioned might still be in a state of flow. This is acknowledged by the author himself on the 2018 updated preface however.
Microsoft PowerPoint by Ciro Santilli 35 Updated +Created
96 well microplate by Ciro Santilli 35 Updated +Created
Biologists are obsessed with these!
Micro Bit getting started by Ciro Santilli 35 Updated +Created
When plugged into Ubuntu 22.04 via the USB Micro-B the Micro Bit mounts as:
/media/$USER/MICROBIT/
e.g.:
/media/ciro/MICROBIT/
for username ciro.
Loading the program is done by simply copying a .hex binary into the image e.g. with:
cp ~/Downloads/microbit_program.hex /media/$USER/MICROBIT/
The file name does not matter, only the .hex extension.
The back power light flashes while upload is happening.
Flashing takes about 10-15 seconds for the 1.8 MB scroll display hello world from microbit-micropython.readthedocs.io/en/v1.0.1/tutorials/hello.html:
from microbit import *
display.scroll("Hello, World!")
and the program starts executing immediately after flash ends.
You can restart the program by clicking the reset button near the USB. When you push down the program dies, and it restarts as soon as you release the button.
Micro Bit version by Ciro Santilli 35 Updated +Created
Identification: kitronik.co.uk/blogs/resources/explore-micro-bit-v1-microbit-v2-differences The easiest thing is perhaps the GPIO notches.
Micrometer by Ciro Santilli 35 Updated +Created
Alternative splicing by Ciro Santilli 35 Updated +Created
Mathieu group by Ciro Santilli 35 Updated +Created

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