Chromosome landing is a technique used in genetics and genomics, particularly in the context of plant breeding and genetic mapping. The method involves using a known genetic marker or a series of markers to identify and isolate a specific location on a chromosome that contains genes of interest. This approach allows researchers to "land" on a chromosome region that is associated with particular traits or characteristics, facilitating the study and manipulation of those traits in breeding programs.
Cis-action refers to a regulatory mechanism in genetics where a regulatory element, such as a promoter or enhancer, influences the expression of a gene located on the same DNA molecule (or the same chromosome). Essentially, cis-regulatory elements are sequences of DNA that are located adjacent to the gene they control, and they can enhance or suppress the transcription of that gene.
BioModels is an online repository and database that provides access to computational models of biological systems. The purpose of BioModels is to facilitate the sharing, exchange, and reproducibility of models within the systems biology community. The repository contains a diverse range of models, which can represent various biological processes, including metabolic pathways, signaling networks, and regulatory mechanisms.
Biopolymers are naturally occurring polymers that are produced by living organisms. They are made up of repeating units called monomers, which are linked together through covalent bonds. Biopolymers can be categorized into three main types: 1. **Proteins**: Composed of amino acid monomers, proteins serve various functions in living organisms, including structural roles (e.g., collagen in connective tissues), enzymatic activity (catalyzing biochemical reactions), and signaling (e.g.
The catalytic triad is a well-known structural motif found in the active sites of certain enzymes, particularly serine proteases. It consists of three specific amino acid residues that work together to facilitate the enzyme's catalytic activity. The classic catalytic triad includes: 1. **Serine (Ser or S)** - Often the key nucleophile in the reaction, which participates in the formation of a transient enzyme-substrate complex.
An Electrophoretic Mobility Shift Assay (EMSA), also known as a gel shift assay, is a technique used to study protein-DNA or protein-RNA interactions. The primary purpose of EMSA is to assess the binding affinity of a protein to a specific nucleic acid sequence, which can provide insights into the regulation of gene expression and other biological processes.
Class II genes typically refer to a category of genes involved in the immune system, particularly those that encode for Major Histocompatibility Complex (MHC) class II molecules. MHC class II molecules play a crucial role in the immune response by presenting antigens to CD4+ T cells, which are key players in the adaptive immune system.
Copy Number Variation (CNV) refers to a type of genetic variation where the number of copies of a particular segment of DNA varies from one individual to another. This variation can involve deletions (loss of DNA segments), duplications (extra copies of segments), or even more complex structural changes within the genome. CNVs can range in size from a few hundred base pairs to several million base pairs and can encompass one or multiple genes.
The Cycle of Quantification and Qualification refers to a framework used in various fields, including research, project management, and quality assurance, to assess and improve the performance or quality of processes, products, or services. Here's a breakdown of the concepts: 1. **Quantification**: This involves measuring and analyzing data to obtain numerical values that can represent performance, quality, or other relevant metrics. Quantification provides a factual basis for understanding how well something is functioning.
Cycloheximide chase is a laboratory technique used to study protein stability and degradation in cells. Cycloheximide is a potent inhibitor of eukaryotic protein synthesis, specifically by blocking the elongation step of translation on ribosomes. This method is particularly used in cell biology and molecular biology to investigate the half-life of proteins within cells.
DNA condensation is the process by which DNA molecules become tightly packed and organized within cells. This is critical for several biological functions, particularly during cell division, when the long strands of DNA need to be compacted to fit within the cell nucleus and to ensure accurate segregation into daughter cells. DNA condensation involves a series of interactions between DNA and various proteins, including histones. Histones are small, positively charged proteins that help to package DNA into a compact structure known as chromatin.
Ethanol precipitation is a technique commonly used in molecular biology and biochemistry for the purification and concentration of nucleic acids, such as DNA and RNA. The method leverages the properties of ethanol (or isopropanol) to selectively precipitate nucleic acids from a solution. ### Process of Ethanol Precipitation: 1. **Preparation of the Sample**: Typically, nucleic acids are in a buffered solution.
DNA repair protein XRCC4 (X-ray Repair Cross-Complementing Protein 4) is a crucial protein involved in the repair of DNA double-strand breaks (DSBs) through a process known as non-homologous end joining (NHEJ). It plays a significant role in maintaining genomic stability and ensuring proper cellular function.
DNase footprinting assay is a molecular biology technique used to identify the specific binding sites of proteins, such as transcription factors, on DNA. The method takes advantage of the fact that when a protein binds to DNA, it can protect the bound region from being digested by deoxyribonuclease (DNase) enzymes.
Phosphodiesterase type 5 (PDE5) inhibitors are a class of medications primarily used to treat erectile dysfunction (ED) and, in some cases, pulmonary arterial hypertension (PAH). The development of these inhibitors is a notable story in the field of pharmacology and drug discovery. ### Discovery 1.
"Double Helix" is a novel by Nancy Werlin, published in 2004. The story revolves around a teenage boy named Eli who discovers that his family has a complex and dark history related to genetic research. The narrative intertwines themes of identity, ethics in science, and the implications of genetic manipulation.
The Eadie–Hofstee diagram is a graphical representation used in biochemistry and enzymology to analyze enzyme kinetics, particularly to determine parameters such as the maximum reaction rate (V_max) and the Michaelis constant (K_m) of an enzyme-catalyzed reaction. The Eadie–Hofstee plot is derived from the Michaelis-Menten equation, which describes the rate of enzymatic reactions as a function of substrate concentration.
Electro-switchable biosurfaces are specialized surfaces whose properties can be dynamically altered through the application of an electric field. These surfaces often incorporate materials or coatings that can respond to electrical stimuli, leading to changes in their chemical or physical characteristics, such as wettability, adhesion, or biocompatibility. ### Key Features: 1. **Dynamic Modulation**: By applying or changing voltage, the surface properties can be switched on and off, or altered in a controlled manner.
The GUS reporter system is a widely used molecular biology technique that utilizes the β-glucuronidase (GUS) enzyme as a reporter gene to study gene expression in plants and some other organisms. The GUS gene is derived from the bacterium *Escherichia coli* and encodes an enzyme that catalyzes the cleavage of β-glucuronides, leading to the release of a colored product when specific substrates are used.
Paul H. Steen is a notable figure in the field of fluid dynamics and engineering. He is known for his contributions to theoretical and experimental research in the study of fluid behavior, particularly in complex systems and phenomena. His work often involves interdisciplinary approaches and has implications in various applications such as environmental science, engineering, and physics.

Pinned article: Introduction to the OurBigBook Project

Welcome to the OurBigBook Project! Our goal is to create the perfect publishing platform for STEM subjects, and get university-level students to write the best free STEM tutorials ever.
Everyone is welcome to create an account and play with the site: ourbigbook.com/go/register. We belive that students themselves can write amazing tutorials, but teachers are welcome too. You can write about anything you want, it doesn't have to be STEM or even educational. Silly test content is very welcome and you won't be penalized in any way. Just keep it legal!
We have two killer features:
  1. topics: topics group articles by different users with the same title, e.g. here is the topic for the "Fundamental Theorem of Calculus" ourbigbook.com/go/topic/fundamental-theorem-of-calculus
    Articles of different users are sorted by upvote within each article page. This feature is a bit like:
    • a Wikipedia where each user can have their own version of each article
    • a Q&A website like Stack Overflow, where multiple people can give their views on a given topic, and the best ones are sorted by upvote. Except you don't need to wait for someone to ask first, and any topic goes, no matter how narrow or broad
    This feature makes it possible for readers to find better explanations of any topic created by other writers. And it allows writers to create an explanation in a place that readers might actually find it.
    Figure 1.
    Screenshot of the "Derivative" topic page
    . View it live at: ourbigbook.com/go/topic/derivative
  2. local editing: you can store all your personal knowledge base content locally in a plaintext markup format that can be edited locally and published either:
    This way you can be sure that even if OurBigBook.com were to go down one day (which we have no plans to do as it is quite cheap to host!), your content will still be perfectly readable as a static site.
    Figure 2.
    You can publish local OurBigBook lightweight markup files to either https://OurBigBook.com or as a static website
    .
    Figure 3.
    Visual Studio Code extension installation
    .
    Figure 4.
    Visual Studio Code extension tree navigation
    .
    Figure 5.
    Web editor
    . You can also edit articles on the Web editor without installing anything locally.
    Video 3.
    Edit locally and publish demo
    . Source. This shows editing OurBigBook Markup and publishing it using the Visual Studio Code extension.
    Video 4.
    OurBigBook Visual Studio Code extension editing and navigation demo
    . Source.
  3. https://raw.githubusercontent.com/ourbigbook/ourbigbook-media/master/feature/x/hilbert-space-arrow.png
  4. Infinitely deep tables of contents:
    Figure 6.
    Dynamic article tree with infinitely deep table of contents
    .
    Descendant pages can also show up as toplevel e.g.: ourbigbook.com/cirosantilli/chordate-subclade
All our software is open source and hosted at: github.com/ourbigbook/ourbigbook
Further documentation can be found at: docs.ourbigbook.com
Feel free to reach our to us for any help or suggestions: docs.ourbigbook.com/#contact