The Human Microbiome Project (HMP) is a major research initiative launched by the National Institutes of Health (NIH) in the United States in 2007. Its primary aim is to characterize the microbial communities that inhabit the human body, collectively termed the human microbiome, and to understand their roles in human health and disease.
IMGT, or the Immunogenetics Information System, is a global reference database and information system dedicated to immunogenetics and bioinformatics. It is primarily focused on the study of immunoglobulins (antibodies), T-cell receptors, and major histocompatibility complex (MHC) molecules, among other components of the immune system.
In silico PCR refers to a computational method used to simulate the polymerase chain reaction (PCR) process using software tools. Instead of performing the physical PCR in a laboratory, in silico PCR allows researchers to predict the outcome of a PCR experiment by modeling the amplification of specific DNA sequences based on known parameters such as DNA templates, primers, and reaction conditions.
Linguistic sequence complexity refers to the structural and functional intricacies found in language sequences, such as sentences or phrases. This concept can encompass various aspects, including: 1. **Syntax**: The arrangement of words and phrases to create well-formed sentences. More complex sentences often involve subordinate clauses, varied sentence structures, and the use of complex grammatical rules.
LiveBench is a web-based platform used for benchmarking and evaluating the performance of various systems and software, particularly in the context of high-performance computing (HPC) and cloud environments. It allows users to measure and compare the performance of different hardware and software configurations in real-time. LiveBench typically involves running specific workloads and gathering metrics related to system performance, resource utilization, and other relevant parameters.
The metabolome refers to the complete set of metabolites—small molecules involved in metabolic processes—within a biological sample or system at a specific point in time. Metabolites are the end products of cellular processes and include a wide range of chemical compounds such as amino acids, fatty acids, carbohydrates, vitamins, and nucleotides.
When annotating models, especially in the context of machine learning, natural language processing, or computer vision, the minimum information required usually includes the following: 1. **Data Source Information**: - **Dataset Name**: The name or identifier of the dataset. - **Version**: The specific version of the dataset being used. - **License**: Information about the usage rights of the data.
SciCrunch is a platform designed to facilitate research and collaboration in the scientific community. It provides tools and resources for researchers to share data, enhance reproducibility, and improve the organization of scientific information. SciCrunch includes features such as: 1. **Resource Discovery**: The platform helps researchers find biological and scientific resources, including reagents, tools, and databases.
Power graph analysis typically refers to the examination of power graphs, which are a specific type of mathematical graph used in various fields such as network theory, computer science, and social sciences. In the context of analyzing power graphs, the focus is often on understanding the relationships and hierarchies that find applications in different domains, such as: 1. **Power Dynamics in Social Networks**: Examining how influence or power is distributed among individuals or organizations within a social network.
The Protein Data Bank (PDB) is a comprehensive database of three-dimensional structural data of biological molecules, primarily proteins and nucleic acids. It serves as a critical resource for researchers in fields such as biochemistry, molecular biology, and structural biology. The PDB contains information about the spatial arrangement of atoms in these macromolecules, which is crucial for understanding their function, interactions, and roles in various biological processes.
Research in Computational Molecular Biology is an interdisciplinary field that combines biology, computer science, mathematics, and statistics to analyze and interpret biological data, particularly at the molecular level. This area of research focuses on developing algorithms, computational models, and software tools to solve biological problems. Key aspects of research in Computational Molecular Biology include: 1. **Bioinformatics**: The application of computational methods to store, retrieve, and analyze biological data, particularly genomic and proteomic information.
As of my last update in October 2023, Silverquant isn't widely recognized as a major entity in finance, technology, or any other prominent field. It's possible that it could refer to a company, product, or service that has emerged more recently, or it could be a lesser-known entity.
Template modeling score is a specific metric used in the context of protein structure prediction and modeling. It typically indicates the quality or accuracy of a model generated using a template, which is often based on known structures from databases like the Protein Data Bank (PDB). When creating a model using template modeling, researchers align a target sequence (the sequence of the protein being studied) with a known structure (the template) and predict the 3D structure of the target based on this alignment.
A **track hub** is a concept used primarily in the field of bioinformatics and genomics, specifically when working with data visualization and management in platforms like the UCSC Genome Browser. A track hub allows researchers to share and visualize various types of genomic data in a centralized manner. ### Key Features of Track Hubs: 1. **Data Sharing**: Track hubs enable the sharing of genomic data sets, such as gene annotations, variations, expressions, and other relevant biological information among researchers and institutions.
Gestational age is a term used to describe the age of a pregnancy, typically measured in weeks from the first day of a woman's last menstrual period (LMP) to the current date or the date of delivery. It helps healthcare providers assess fetal development and determine expected due dates. Gestational age is usually divided into three trimesters: 1. **First Trimester:** Weeks 1 to 12 2. **Second Trimester:** Weeks 13 to 26 3.
Atoms are the basic building blocks of matter and the fundamental units of chemical elements. They consist of three main types of subatomic particles: 1. **Protons**: Positively charged particles found in the nucleus (the central part) of the atom. 2. **Neutrons**: Neutral particles (no charge) that also reside in the nucleus alongside protons. 3. **Electrons**: Negatively charged particles that orbit the nucleus in energy levels or shells.
The UCSC Genome Browser is a web-based tool that provides access to a comprehensive set of genomic data and annotations for a variety of organisms, including humans and many model organisms. It is hosted by the University of California, Santa Cruz (UCSC) and is widely used by researchers in genomics, genetics, and molecular biology. The browser allows users to visualize and explore the genome sequences, gene annotations, regulatory elements, comparative genomics data, and other functional elements.

Pinned article: Introduction to the OurBigBook Project

Welcome to the OurBigBook Project! Our goal is to create the perfect publishing platform for STEM subjects, and get university-level students to write the best free STEM tutorials ever.
Everyone is welcome to create an account and play with the site: ourbigbook.com/go/register. We belive that students themselves can write amazing tutorials, but teachers are welcome too. You can write about anything you want, it doesn't have to be STEM or even educational. Silly test content is very welcome and you won't be penalized in any way. Just keep it legal!
We have two killer features:
  1. topics: topics group articles by different users with the same title, e.g. here is the topic for the "Fundamental Theorem of Calculus" ourbigbook.com/go/topic/fundamental-theorem-of-calculus
    Articles of different users are sorted by upvote within each article page. This feature is a bit like:
    • a Wikipedia where each user can have their own version of each article
    • a Q&A website like Stack Overflow, where multiple people can give their views on a given topic, and the best ones are sorted by upvote. Except you don't need to wait for someone to ask first, and any topic goes, no matter how narrow or broad
    This feature makes it possible for readers to find better explanations of any topic created by other writers. And it allows writers to create an explanation in a place that readers might actually find it.
    Figure 1.
    Screenshot of the "Derivative" topic page
    . View it live at: ourbigbook.com/go/topic/derivative
  2. local editing: you can store all your personal knowledge base content locally in a plaintext markup format that can be edited locally and published either:
    This way you can be sure that even if OurBigBook.com were to go down one day (which we have no plans to do as it is quite cheap to host!), your content will still be perfectly readable as a static site.
    Figure 5. . You can also edit articles on the Web editor without installing anything locally.
    Video 3.
    Edit locally and publish demo
    . Source. This shows editing OurBigBook Markup and publishing it using the Visual Studio Code extension.
  3. https://raw.githubusercontent.com/ourbigbook/ourbigbook-media/master/feature/x/hilbert-space-arrow.png
  4. Infinitely deep tables of contents:
    Figure 6.
    Dynamic article tree with infinitely deep table of contents
    .
    Descendant pages can also show up as toplevel e.g.: ourbigbook.com/cirosantilli/chordate-subclade
All our software is open source and hosted at: github.com/ourbigbook/ourbigbook
Further documentation can be found at: docs.ourbigbook.com
Feel free to reach our to us for any help or suggestions: docs.ourbigbook.com/#contact