The metabolome refers to the complete set of metabolites—small molecules involved in metabolic processes—within a biological sample or system at a specific point in time. Metabolites are the end products of cellular processes and include a wide range of chemical compounds such as amino acids, fatty acids, carbohydrates, vitamins, and nucleotides.
SciCrunch is a platform designed to facilitate research and collaboration in the scientific community. It provides tools and resources for researchers to share data, enhance reproducibility, and improve the organization of scientific information. SciCrunch includes features such as: 1. **Resource Discovery**: The platform helps researchers find biological and scientific resources, including reagents, tools, and databases.
The Protein Data Bank (PDB) is a comprehensive database of three-dimensional structural data of biological molecules, primarily proteins and nucleic acids. It serves as a critical resource for researchers in fields such as biochemistry, molecular biology, and structural biology. The PDB contains information about the spatial arrangement of atoms in these macromolecules, which is crucial for understanding their function, interactions, and roles in various biological processes.
Research in Computational Molecular Biology is an interdisciplinary field that combines biology, computer science, mathematics, and statistics to analyze and interpret biological data, particularly at the molecular level. This area of research focuses on developing algorithms, computational models, and software tools to solve biological problems. Key aspects of research in Computational Molecular Biology include: 1. **Bioinformatics**: The application of computational methods to store, retrieve, and analyze biological data, particularly genomic and proteomic information.
Template modeling score is a specific metric used in the context of protein structure prediction and modeling. It typically indicates the quality or accuracy of a model generated using a template, which is often based on known structures from databases like the Protein Data Bank (PDB). When creating a model using template modeling, researchers align a target sequence (the sequence of the protein being studied) with a known structure (the template) and predict the 3D structure of the target based on this alignment.
A **track hub** is a concept used primarily in the field of bioinformatics and genomics, specifically when working with data visualization and management in platforms like the UCSC Genome Browser. A track hub allows researchers to share and visualize various types of genomic data in a centralized manner. ### Key Features of Track Hubs: 1. **Data Sharing**: Track hubs enable the sharing of genomic data sets, such as gene annotations, variations, expressions, and other relevant biological information among researchers and institutions.
The UCSC Genome Browser is a web-based tool that provides access to a comprehensive set of genomic data and annotations for a variety of organisms, including humans and many model organisms. It is hosted by the University of California, Santa Cruz (UCSC) and is widely used by researchers in genomics, genetics, and molecular biology. The browser allows users to visualize and explore the genome sequences, gene annotations, regulatory elements, comparative genomics data, and other functional elements.
The International Society for Computational Biology (ISCB) Student Council is a group dedicated to supporting and representing the interests of students in the field of computational biology. The council serves as an advocate for student issues within the broader ISCB community and facilitates networking, education, and professional development opportunities for students. The goals of the ISCB Student Council typically include: 1. **Networking**: Creating opportunities for students to connect with peers and professionals in the field, fostering collaborations and friendships.
FinSet, short for "finite set," is a mathematical object that consists of a finite collection of distinct elements. In the context of set theory, a set is simply a collection of objects, which can be anything: numbers, letters, symbols, or even other sets. Finite sets are specifically those that contain a limited number of elements, as opposed to infinite sets, which have an unlimited number of elements.
Akoustolith is a type of acoustic countermeasure used in various applications, particularly in underwater environments. Though specific definitions and applications might vary slightly, akoustoliths are generally designed to confuse or deter sonar detection by mimicking the sound signatures of marine life or natural underwater features. This can be particularly useful for naval operations, as they can help conceal submarines or other vessels from sonar systems.
A "contact shot" generally refers to a shooting technique or situation where the firearm is discharged with the muzzle of the gun in direct contact with, or very close to, the target. This method is often characterized by the following: 1. **Close Range**: The shot is fired from a very short distance, usually just a few inches from the target.
Handgun effectiveness refers to the capability of handguns to incapacitate a target, typically in self-defense or law enforcement scenarios. This effectiveness is influenced by several factors, including: 1. **Caliber**: The size of the bullet, typically measured in millimeters or inches, affects the stopping power and penetration ability. Common calibers include .22, 9mm, .40, .45, and others. 2. **Bullet Design**: The type of bullet (e.g.
Shooting reconstruction is a forensic process used to analyze and recreate the circumstances surrounding a shooting incident. This involves a thorough examination of the scene, evidence collection, and the application of various scientific and investigative techniques to understand the sequence of events leading up to, during, and after the shooting.
The Thompson-LaGarde tests, also known as the Thompson-LaGarde method or the Thompson-LaGarde classification, refer to a series of tests used in depression research and clinical practice to assess and categorize depressive symptoms and their severity. While not as widely known as other scales like the Hamilton Depression Rating Scale or the Beck Depression Inventory, the Thompson-LaGarde tests may specifically be used in certain contexts related to psychological evaluation or research studies.
Pinned article: Introduction to the OurBigBook Project
Welcome to the OurBigBook Project! Our goal is to create the perfect publishing platform for STEM subjects, and get university-level students to write the best free STEM tutorials ever.
Everyone is welcome to create an account and play with the site: ourbigbook.com/go/register. We belive that students themselves can write amazing tutorials, but teachers are welcome too. You can write about anything you want, it doesn't have to be STEM or even educational. Silly test content is very welcome and you won't be penalized in any way. Just keep it legal!
Intro to OurBigBook
. Source. We have two killer features:
- topics: topics group articles by different users with the same title, e.g. here is the topic for the "Fundamental Theorem of Calculus" ourbigbook.com/go/topic/fundamental-theorem-of-calculusArticles of different users are sorted by upvote within each article page. This feature is a bit like:
- a Wikipedia where each user can have their own version of each article
- a Q&A website like Stack Overflow, where multiple people can give their views on a given topic, and the best ones are sorted by upvote. Except you don't need to wait for someone to ask first, and any topic goes, no matter how narrow or broad
This feature makes it possible for readers to find better explanations of any topic created by other writers. And it allows writers to create an explanation in a place that readers might actually find it.Figure 1. Screenshot of the "Derivative" topic page. View it live at: ourbigbook.com/go/topic/derivativeVideo 2. OurBigBook Web topics demo. Source. - local editing: you can store all your personal knowledge base content locally in a plaintext markup format that can be edited locally and published either:This way you can be sure that even if OurBigBook.com were to go down one day (which we have no plans to do as it is quite cheap to host!), your content will still be perfectly readable as a static site.
- to OurBigBook.com to get awesome multi-user features like topics and likes
- as HTML files to a static website, which you can host yourself for free on many external providers like GitHub Pages, and remain in full control
Figure 3. Visual Studio Code extension installation.Figure 4. Visual Studio Code extension tree navigation.Figure 5. Web editor. You can also edit articles on the Web editor without installing anything locally.Video 3. Edit locally and publish demo. Source. This shows editing OurBigBook Markup and publishing it using the Visual Studio Code extension.Video 4. OurBigBook Visual Studio Code extension editing and navigation demo. Source. - Infinitely deep tables of contents:
All our software is open source and hosted at: github.com/ourbigbook/ourbigbook
Further documentation can be found at: docs.ourbigbook.com
Feel free to reach our to us for any help or suggestions: docs.ourbigbook.com/#contact





