Bayes factor Created 2026-09-28 Updated 2026-10-18
A Bayes factor measures how data change the relative support for two specified statistical models. Write for their Bayesian model evidence and define the direction explicitly:For positive finite , a value above one favors over ; a value below one favors over . Reversing the comparison gives , the opposite direction used in some formulas below.
For mutually exclusive, exhaustive with positive prior probabilities, divide their two Bayes' theorem formulas. Their common data normalizer cancels, leavingThe Bayes factor therefore multiplies prior odds into posterior odds. It is evidence conditional on the specified statistical models and their within-model prior distributions; it is not . Model prior probabilities supply a separate input.[ref]
Bayes Factors by Robert E. Kass and Adrian E. Raftery. Kass and Raftery, Bayes Factors (1995), section 3.1, p. 776: posterior odds, prior odds, and direction of the Bayes factor
For an original stipulated example, consider ten independent and identically distributed Bernoulli trials, with heads as success. Compare with , both fixed before seeing the data. Take to be one particular ordered sequence containing eight heads and two tails. The likelihood function under either point model is , soIf , the prior odds for against are . Hence the posterior odds are , andEqual model prior probabilities would instead give . The same Bayes factor can thus accompany different posterior probabilities. These statements condition on the two-model comparison; they do not establish that either statistical model describes a real coin.
Using the heads count instead of the ordered sequence changes the sample space. The binomial distribution assigns it mass . The same binomial coefficient multiplies both models' Bayesian model evidence and cancels in their Bayes factor. Mixing an ordered-sequence numerator with a count denominator would introduce an erroneous factor of .
Fix the candidate statistical models, their parameter prior distributions, and model prior probabilities before using the current data for this update. The Bayes factor is useful because it separates evidence from model prior odds, but it still depends on the parameter prior distributions. An improper prior has an arbitrary multiplicative normalization: multiplying its kernel by multiplies its formal marginal likelihood by , even if the within-model posterior distribution is normalizable. Without a separately justified convention, the ordinary Bayes factor is then undefined up to arbitrary constants.[ref]
Bayes Factors by Robert E. Kass and Adrian E. Raftery. Kass and Raftery, Bayes Factors (1995), sections 5.2–5.3, pp. 782–783: prior sensitivity and undefined multiplicative constants
Bayesian model evidence Created 2026-09-24 Updated 2026-10-18
The Bayesian model evidence is the prior predictive distribution evaluated at the data . For a statistical model with a normalized prior density , its marginal likelihood isThis is an expected value of the likelihood function under the prior distribution; for discrete statistical parameters, replace the integral by a sum. For continuous observations, is a probability density function value with respect to a specified data reference measure, rather than a probability of one exact observation. Comparisons must use the same data and reference measure. The same normalizes the within-model Bayesian posterior and supplies the between-model comparison in a Bayes factor.[ref]
Bayes Factors by Robert E. Kass and Adrian E. Raftery. Kass and Raftery, Bayes Factors (1995), section 3.1, p. 776, equations (1)–(2): integrating over parameter priors
A normalized prior distribution makes the Bayesian model evidence an average, so it cannot exceed the largest likelihood function value on its support. A broad prior distribution can assign little mass to values that predict the data well, even when one value gives an excellent fit. The worked uniform-alternative binomial Bayes factor below makes the difference between averaging and maximum likelihood estimation explicit.
