Competitive inhibitor 2026-11-05
A competitive inhibitor is an enzyme inhibitor that produces competitive inhibition relative to a specified substrate. In the usual single-substrate kinetic description, it reduces the low-substrate response while leaving the limiting rate unchanged. A common molecular model has the inhibitor bind free enzyme and prevent formation of the enzyme-substrate complex; the kinetic classification alone does not prove a particular binding location.[ref]
Symbolism and Terminology in Enzyme Kinetics (Recommendation 1981) by Nomenclature Committee of the International Union of Biochemistry. §§6.1–6.4: reversible inhibition, competitive classification and mechanistic interpretation
For the simple reversible model at fixed free inhibitor concentration ,Here is the inhibition constant for this model and the uninhibited Michaelis constant. Take illustrative values , , and . Then and the apparent Michaelis constant is6micromolar. At , the inhibited rate is3micromolar per minute, compared with6without inhibitor.
As substrate concentration grows, both rates approach the same limiting value in this model. That is a limit, not an assertion that a particular finite substrate addition removes all inhibition. Characterizing a candidate therefore requires rates over suitable substrate and inhibitor ranges with controlled enzyme amount; one reduced rate does not establish that the inhibitor is competitive.[ref]
Symbolism and Terminology in Enzyme Kinetics (Recommendation 1981) by Nomenclature Committee of the International Union of Biochemistry. §4.2, Michaelis-Menten parameters; §6.4, operational inhibition classes
Enzyme inhibitor 2026-10-18
An enzyme inhibitor lowers an enzyme's reaction rate. In reversible enzyme inhibition, reducing free inhibitor concentration can restore activity; slow release can make this difficult to distinguish experimentally from irreversible inactivation. Competitive inhibition and mixed inhibition describe different changes in enzyme kinetics; pure noncompetitive inhibition is a special case of mixed inhibition, not a name for every inhibitor that binds away from an active site.[ref]
Symbolism and Terminology in Enzyme Kinetics (Recommendation 1981) by Nomenclature Committee of the International Union of Biochemistry. Symbolism and Terminology in Enzyme Kinetics, recommendation 1981, sections 6.1 and 6.4: reversibility and the ambiguity of non-competitive
The useful question is how adding substrate changes the inhibition. The model below connects binding to a measurable reaction rate, predicts when more substrate can overcome inhibition, and supplies examples for comparison with an enzyme inhibition initial-rate assay. Its inhibition constants are explicitly defined; neither a binding cartoon nor one reduced reaction rate by itself determines a mechanism.
Reversible enzyme inhibition: which bound states can form?
Original branching scheme for a single substrate. is free enzyme, free substrate, free inhibitor, the productive enzyme-substrate complex, and and inactive complexes. Reversible vertical arrows show inhibitor binding and release. In competitive inhibition the right-hand inhibitor-binding branch is absent. Pure noncompetitive inhibition retains both branches with equal inhibition constants; general mixed inhibition permits unequal constants. The drawing specifies populations and allowed steps, not an atomic binding-site geometry. Details. Malonate Created 2026-10-18 Updated 2026-11-05
Malonate is the dianion of malonic acid, with two carboxylate groups separated by one methylene group. Its three-carbon skeleton resembles part of the four-carbon skeleton of succinate.
Malonate is a classical inhibitor of succinate dehydrogenase: structural similarity allows binding without the normal substrate transformation. The example illustrates how an enzyme inhibitor can probe the contribution of a particular reaction to a metabolic pathway.
Trypsin colorimetric assay 2026-10-18
A trypsin colorimetric assay follows enzyme activity through absorbance at . Trypsin cleaves an amide bond in the synthetic arginine derivative BAPNA, releasing p-Nitroaniline.[ref]
Enzymatic Assay of APROTININ - Sigma Quality Control Test Procedure. Enzymatic Assay of APROTININ, Sigma quality-control procedure, p. 1: Principle and Conditions
The inspected Sigma procedure prepares fresh trypsin in cold hydrochloric acid and fully dissolves BAPNA. Its buffer solution stock contains triethanolamine and calcium chloride, at pH . Three cuvettes compare trypsin, trypsin plus the enzyme inhibitor aprotinin, and a blank replacing trypsin with its acid solvent. Sodium chloride solution replaces aprotinin in the uninhibited control. A thermostatted instrument for spectrophotometry holds and a light path. After equilibration, adding BAPNA starts approximately five minutes of absorbance recording. The uninhibited sample checks activity; the blank checks background; the inhibited sample tests suppression.[ref]
Let , and denote the measured absorbance slopes per minute over the same linear time interval. Blank subtraction gives and . If p-Nitroaniline accounts for the changing absorbance, the Beer-Lambert law givesHere is product molar concentration and is the geometric light path through the chemical solution. Sigma uses .[ref]
Enzymatic Assay of APROTININ - Sigma Quality Control Test Procedure. Enzymatic Assay of APROTININ, p. 2: Calculations, millimolar extinction coefficient at 405 nm
Choose original illustrative slopes , and . The corrected uninhibited slope is , giving at . In , the product amount of substance increases at . The corrected inhibited slope is , half as large. The relative suppression is thereforeThe background cancels in the numerator, but remains essential in the denominator. Using uncorrected slopes would instead give about . Differentiating with fixed and explains the rate conversion; dimensional analysis checks it independently, since .
The inference is a reaction rate on BAPNA under the stated conditions, rather than a direct count of trypsin molecules or proof of every cut in a protein. Cloudiness, other absorbing solutes, or different product protonation can compromise the Beer-Lambert law interpretation. A matched blank and a linear interval are therefore part of the measurement's meaning. A coloured enzyme inhibitor may require its own matched blank; a changed substrate or pH requires a fresh calibration. The constructed constant slopes above describe only that interval, not indefinite product accumulation.

