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Archaea are a major evolutionary lineage distinct from bacteria. The cellular comparison here concerns the prokaryotic members of archaea; see two-domain system for broader clade usage. Their biological cells have a nucleoid rather than a membrane-bounded cell nucleus, yet aspects of DNA replication, transcription and biological translation resemble those of eukaryotes. Their characteristic lipids differ chemically from the usual bacterial membrane lipids, and their cell walls, when present, lack peptidoglycan. See OpenStax Biology 2e, 22.2: archaeal distinctions.

Some archaea perform methanogenesis, producing methane as part of their metabolism. Archaea also inhabit ordinary soils and oceans: extreme habitats do not define the lineage. See OpenStax Biology 2e, 22.1: moderate and extreme environments. Woese and Fox's 1977 analysis of ribosomal RNA distinguished the methanogenic group they called archaebacteria from typical bacteria. Their proposed three primary lines of descent were a historical interpretation, rather than the final resolution of deep phylogenetics. See Woese and Fox, 1977: Phylogenetic structure of the prokaryotic domain.

Identified Arctic methane sources include anaerobic decomposition in wetlands and saturated tundra, bubbles from lakes and thermokarst lakes formed by thawing permafrost, geological gas seeps, and leakage from fossil-fuel extraction or transport. Warming can expose frozen organic carbon to microbes, promoting methanogenesis where oxygen is scarce; it does not convert all thawed carbon into methane. Field measurements of Siberian thaw lakes directly documented substantial methane bubbling associated with lake expansion into permafrost.

Shelf sediments can also generate or release methane, including gas stored beneath frozen sediment and, where pressure and temperature permit, gas in hydrates. The proposed Arctic methane feedback needs several links: seabed warming must reach the relevant material, release or production must occur, and enough methane must reach the atmosphere rather than dissolve or be oxidized in sediment and water. Visible plumes alone do not establish an imminent large atmospheric pulse.

Methane is a powerful greenhouse gas because it absorbs planetary thermal infrared radiation and alters the atmospheric emission balance. It also affects atmospheric chemistry, including ozone and stratospheric water vapour. Its relatively short atmospheric lifetime makes its warming contribution particularly strong over short horizons. The global warming potential compares time-integrated forcing from equal-mass pulses with that of carbon dioxide; the horizon must always be stated. Values available before this examination were about 72 over 20 years and 25 over 100 years, including the specified methane indirect effects, as recorded in the 2007 IPCC assessment. These are historical assessment values, not timeless material constants or instantaneous temperature multipliers.

A separate direct feedback is the ice-albedo feedback. When sea ice disappears, darker open water reflects less sunlight, stores more ocean heat content, and favours further melting and delayed freeze-up. Locally,For illustration, replacing ice of surface albedo $0.6$ by water of surface albedo $0.1$ under $200\mathrm{W}{\mathrm{m}}^{-2}$ incoming sunlight adds $100\mathrm{W}{\mathrm{m}}^{-2}$ of absorption on the newly exposed area. Global forcing requires weighting by affected area, season and clouds; this is a local example. Sea-ice loss can amplify warming through reduced reflection without requiring methane release. Increased evaporation and altered clouds supply further feedbacks, but their short-wave and long-wave effects can compete.

Permafrost is ground that remains at or below its freezing threshold for at least two consecutive years. Thaw can expose previously frozen organic material to decomposition, with methanogenesis where conditions are anaerobic.

Thermokarst is subsidence and related landscape change caused by thaw of ice-rich permafrost. Resulting lakes and saturated sediments can promote methanogenesis.