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A fluorescent ubiquitination-based cell-cycle indicator using phase-dependent stability of reporter fusions. The original Cdt1 and geminin reporters distinguish much of G1 phase from S phase/G2 phase/M phase, rather than reporting all phase boundaries independently.[ref]
A replication-control protein whose regulated degradation motif is used in the original Fucci reporters.
Its normal role includes restricting replication licensing through interaction with Cdt1. In a Fucci construct, a selected degradation region is used to report regulated turnover; the reporter signal should not be equated with the full native protein’s activity. [ref]
Molecular Biology of the Cell, 4th edition by Bruce Alberts and others. Chapter 17, Control of DNA Replication
An SKP1–cullin–F-box ubiquitin ligase complex directing substrate-selective ubiquitination. Recognition of degradation signals couples substrate destruction to cellular state.
A budding-yeast cyclin-dependent-kinase inhibitor. Phosphorylation-dependent recognition by an SCF ubiquitin ligase couples its destruction to S-phase entry.
A pause or block in progression through the cell cycle. It can permit repair or become durable; arrest is not itself proof that molecular damage has been repaired.
The retinoblastoma tumour-suppressor protein, which restrains E2F-dependent proliferation when appropriately active. Regulation by cyclin-dependent kinases couples this restraint to cell-cycle signals.
A regulatory coactivator of the anaphase-promoting complex. Its activity helps maintain low mitotic-cyclin abundance during late mitosis and G1, before the next cell-cycle programme.
A surveillance mechanism that restrains mitotic exit when the budding-yeast spindle is mispositioned. It is distinct from kinetochore-attachment surveillance by the spindle checkpoint.
A mechanism delaying mitotic entry when interphase centrosomes are misoriented relative to the niche in fly male germline stem cells. It couples geometry to the timing of an oriented division.
The budding-yeast signalling network promoting sustained Cdc14 activity and completion of mitosis. Its upstream Tem1 activity is restrained during an active spindle position checkpoint.
Quiescence is a reversible nonproliferating cellular state, often designated , from which suitable signals can permit re-entry into the cell cycle. A biological cell in quiescence can retain active metabolism, maintain its specialized functions and respond to its environment. This distinguishes quiescence from cell death and from irreversible loss of proliferative capacity. For example, some resting lymphocytes resume cell proliferation after activation. [ref]
Molecular Biology of the Cell, 4th edition by Bruce Alberts and others. Chapter 17, Extracellular Control of Cell Division, Cell Growth, and Apoptosis: G0
A 3D cell culture grows biological cells in a spatial arrangement extending through three dimensions, for example as aggregates or within an extracellular matrix. This changes contact geometry, mechanical constraints and access to nutrients relative to a flat monolayer. An epithelial cyst can reveal an enclosed lumen and directional organization that a two-dimensional image misses. Three-dimensional geometry alone does not establish that the culture reproduces every property of its source tissue. [ref]
Animal Cell Culture Guide by ATCC. Culture systems and three-dimensional culture models
A focal adhesion is a multiprotein connection between integrins and the actin cytoskeleton. It can transmit traction and change its assembly in response to loading.
A cell-cell junction coupling adhesion to the cytoskeleton. It can transmit mechanical load while being remodelled during epithelial movements.
Pinned article: Introduction to the OurBigBook Project
Welcome to the OurBigBook Project! Our goal is to create the perfect publishing platform for STEM subjects, and get university-level students to write the best free STEM tutorials ever.
Everyone is welcome to create an account and play with the site: ourbigbook.com/go/register. We belive that students themselves can write amazing tutorials, but teachers are welcome too. You can write about anything you want, it doesn't have to be STEM or even educational. Silly test content is very welcome and you won't be penalized in any way. Just keep it legal!
Intro to OurBigBook
. Source. We have two killer features:
- topics: topics group articles by different users with the same title, e.g. here is the topic for the "Fundamental Theorem of Calculus" ourbigbook.com/go/topic/fundamental-theorem-of-calculusArticles of different users are sorted by upvote within each article page. This feature is a bit like:
- a Wikipedia where each user can have their own version of each article
- a Q&A website like Stack Overflow, where multiple people can give their views on a given topic, and the best ones are sorted by upvote. Except you don't need to wait for someone to ask first, and any topic goes, no matter how narrow or broad
This feature makes it possible for readers to find better explanations of any topic created by other writers. And it allows writers to create an explanation in a place that readers might actually find it.Figure 1. Screenshot of the "Derivative" topic page. View it live at: ourbigbook.com/go/topic/derivativeVideo 2. OurBigBook Web topics demo. Source. - local editing: you can store all your personal knowledge base content locally in a plaintext markup format that can be edited locally and published either:This way you can be sure that even if OurBigBook.com were to go down one day (which we have no plans to do as it is quite cheap to host!), your content will still be perfectly readable as a static site.
- to OurBigBook.com to get awesome multi-user features like topics and likes
- as HTML files to a static website, which you can host yourself for free on many external providers like GitHub Pages, and remain in full control
Figure 2. You can publish local OurBigBook lightweight markup files to either OurBigBook.com or as a static website.Figure 3. Visual Studio Code extension installation.Figure 5. . You can also edit articles on the Web editor without installing anything locally. Video 3. Edit locally and publish demo. Source. This shows editing OurBigBook Markup and publishing it using the Visual Studio Code extension. - Infinitely deep tables of contents:
All our software is open source and hosted at: github.com/ourbigbook/ourbigbook
Further documentation can be found at: docs.ourbigbook.com
Feel free to reach our to us for any help or suggestions: docs.ourbigbook.com/#contact





