Solution

ID: past-exam-of-the-biological-physics-course-of-the-university-of-oxford/2018/6/b/solution

The RNA world hypothesis proposes an early stage in which RNA-like molecules carried heritable sequence information and also performed important catalytic functions, before the present division of labour among DNA, RNA and proteins. Complementary base pairing supplies a route to template-directed information copying, while sequence-dependent RNA folding can create catalytic structures. This helps address the apparent circularity of requiring protein enzymes to copy genes whose expression already requires an elaborate protein-synthesis apparatus.
Modern biology supplies evidence for the necessary capacities. Ribozymes catalyse reactions, and self-splicing introns demonstrate RNA-dependent processing without a dedicated protein enzyme for that chemistry. The ribosome's peptidyl-transferase centre is built principally from RNA, with catalytic geometry located in its RNA core; structural work provides direct evidence that this central protein-synthesis chemistry is RNA based.[ref] RNA also remains central as messenger, adaptor and regulatory material. These observations make RNA catalysis and information storage physically plausible rather than assuming that all catalysts must be proteins.
They do not prove a complete historical sequence. A viable early system still needs plausible nucleotide supply and activation, polymerization, template copying with sufficient fidelity, product-strand separation, compatibility of catalytic and copying conditions, an energy source and some means of maintaining useful combinations. RNA's chemical lability and the challenge of separating paired products are constraints, not details supplied automatically by base pairing. The first hereditary chemistry might also have involved related polymers or cooperative RNA–peptide systems rather than an exclusively RNA organism.
The later advantages of DNA as a relatively stable storage medium and proteins as catalysts with chemically varied side chains help explain the present division of labour. The hypothesis is therefore a testable family of evolutionary scenarios supported by molecular capabilities and biological relics, not a direct observation of prebiotic life or proof that an isolated modern RNA already self-replicates autonomously.

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