Peripatric speciation is a type of speciation that occurs when a small population becomes isolated from a larger population of the same species. This isolation typically happens due to geographical barriers, such as mountains, rivers, or distances that prevent interbreeding. Because the isolated population is smaller, it may experience different selective pressures and genetic drift, leading to evolutionary changes over time.
"Northern Provinces" can refer to different regions depending on the context. Here are a few possible interpretations: 1. **South Africa**: Historically, the term "Northern Provinces" was used to refer to the provinces in the northern part of South Africa, specifically the provinces of Limpopo, Mpumalanga, and parts of Gauteng. However, the term is less commonly used in contemporary discussions, as South Africa's provinces have undergone changes and rebranding since the end of apartheid.
The term "pantropical" refers to a distribution or occurrence that spans across the tropical regions of the world. In a biological or ecological context, "pantropical" is often used to describe species of plants, animals, or other organisms that are found in tropical areas across multiple continents, typically between the Tropic of Cancer and the Tropic of Capricorn.
The Wallace Line is a biogeographical boundary that delineates the distinct flora and fauna of the islands of Southeast Asia. It was proposed by the British naturalist Alfred Russel Wallace in the 19th century and runs between the islands of Bali and Lombok, as well as between Borneo and Sulawesi, marking the transition between the Asian and Australian ecozones.
Alignment-free sequence analysis is a computational approach used in bioinformatics to compare biological sequences, such as DNA, RNA, or proteins, without the need to align them in a traditional sense. In conventional sequence alignment (like global or local alignment), sequences are arranged to identify regions of similarity, which can be computationally intensive and may be biased by gaps and mismatches.
The Steppic Biogeographic Region, also known as the steppe biome, refers to a large area characterized primarily by grassland ecosystems, typically found in temperate regions. This biogeographic region is dominated by grasses and has very few trees, primarily due to its climate, which features moderate to low rainfall and significant fluctuations in temperature between seasons.
Bioinformatics organizations focus on the field of bioinformatics, which combines biology, computer science, and information technology to analyze and interpret biological data. These organizations may be involved in various activities, including research, development of software and tools, data analysis, and promoting education and collaboration in the field of bioinformatics. Here are some key aspects and types of bioinformatics organizations: 1. **Professional Societies**: Organizations that support professionals in bioinformatics through networking, conferences, and publication opportunities.
The Actino-ugpB RNA motif is a type of RNA sequence that has been identified in certain bacteria, particularly within the phylum Actinobacteria. It is a conserved structural element that is thought to play a role in the regulation of gene expression. Typically, RNA motifs like Actino-ugpB can function as riboswitches or regulatory elements that respond to specific metabolites or environmental conditions to modulate the activity of nearby genes.
The Basel Computational Biology Conference is a scientific conference that focuses on advancements and developments in computational biology, a field that combines elements of biology, computer science, mathematics, and engineering. The conference typically brings together researchers, practitioners, and students to discuss topics such as bioinformatics, systems biology, computational genomics, and related areas. Participants often present their latest research findings, engage in discussions, and attend workshops and keynote lectures from leading experts in the field.
EVA, or Economic Value Added, is a financial performance metric that measures a company's ability to generate value above its cost of capital. It is often used as a benchmark to assess the profitability and efficiency of a company's operations. The concept was popularized by Stern Stewart & Co. in the 1990s.
DREAM Challenges is an initiative that aims to accelerate discoveries in biomedical research by inviting the scientific community to collaborate on predictive modeling and data analysis challenges. These challenges often focus on specific problems in areas such as genomics, drug discovery, disease research, and other health-related fields. Participants are typically provided with datasets related to a particular challenge and are encouraged to develop and test algorithms or models that can address specific scientific questions or predictions.
De novo protein structure prediction refers to the process of predicting the three-dimensional (3D) structure of a protein solely from its amino acid sequence, without using any information from homologous protein structures. This method relies on computational algorithms and models to simulate the physical and chemical principles governing protein folding, allowing researchers to make educated guesses about how a protein will fold into its functional form.
C17orf75, or "Chromosome 17 Open Reading Frame 75," is a gene located on chromosome 17. It encodes a protein whose specific function is not fully understood. Like many other genes, it may play various roles in cellular processes, but detailed studies regarding its biological significance, potential associations with diseases, or mechanisms of action are still ongoing. As with many genes, research evolves, and new findings could shed light on its roles in human health or disease.
DNA barcoding in diet assessment is a molecular technique used to identify and analyze the dietary components of an organism’s diet by analyzing the DNA sequences of the consumed food items. This method provides a more accurate and sensitive means of identifying prey or food sources compared to traditional methods that often rely on morphological identification.
Canadian Bioinformatics Workshops (CBW) is an initiative aimed at providing training and resources in bioinformatics to researchers and students in Canada and beyond. These workshops typically cover a wide range of topics within the field, including but not limited to data analysis, software tools, programming languages, and various bioinformatics applications in genomics and proteomics. CBW is often organized by institutions, universities, or research groups and may feature hands-on, practical training sessions led by experts in the field.
A DNA binding site refers to a specific region on the DNA molecule where proteins, such as transcription factors, enzymes, and other regulatory proteins, attach to the DNA. These sites are typically characterized by specific nucleotide sequences that are recognized and bound by these proteins, facilitating various biological processes such as gene regulation, DNA replication, repair, and chromatin remodeling.
Direct Coupling Analysis (DCA) is a computational technique used in various fields such as biology, particularly in the analysis of protein structures and interactions, as well as in machine learning and statistics. In the context of protein science, DCA is used to identify and model the interactions between different residues in a protein sequence. The primary goal is to discern which amino acids are directly coupled to each other through evolutionary relationships.
Fish DNA barcoding is a genetic method used to identify and classify fish species based on a short, standardized region of their DNA. This technique leverages a specific gene, often a segment of the mitochondrial cytochrome c oxidase subunit I (COI) gene, to create a "bar code" unique to each species. The primary goal of fish DNA barcoding is to provide a reliable and efficient means of species identification, especially for those that might be difficult to distinguish morphologically.
Pinned article: Introduction to the OurBigBook Project
Welcome to the OurBigBook Project! Our goal is to create the perfect publishing platform for STEM subjects, and get university-level students to write the best free STEM tutorials ever.
Everyone is welcome to create an account and play with the site: ourbigbook.com/go/register. We belive that students themselves can write amazing tutorials, but teachers are welcome too. You can write about anything you want, it doesn't have to be STEM or even educational. Silly test content is very welcome and you won't be penalized in any way. Just keep it legal!
Intro to OurBigBook
. Source. We have two killer features:
- topics: topics group articles by different users with the same title, e.g. here is the topic for the "Fundamental Theorem of Calculus" ourbigbook.com/go/topic/fundamental-theorem-of-calculusArticles of different users are sorted by upvote within each article page. This feature is a bit like:
- a Wikipedia where each user can have their own version of each article
- a Q&A website like Stack Overflow, where multiple people can give their views on a given topic, and the best ones are sorted by upvote. Except you don't need to wait for someone to ask first, and any topic goes, no matter how narrow or broad
This feature makes it possible for readers to find better explanations of any topic created by other writers. And it allows writers to create an explanation in a place that readers might actually find it.Figure 1. Screenshot of the "Derivative" topic page. View it live at: ourbigbook.com/go/topic/derivativeVideo 2. OurBigBook Web topics demo. Source. - local editing: you can store all your personal knowledge base content locally in a plaintext markup format that can be edited locally and published either:This way you can be sure that even if OurBigBook.com were to go down one day (which we have no plans to do as it is quite cheap to host!), your content will still be perfectly readable as a static site.
- to OurBigBook.com to get awesome multi-user features like topics and likes
- as HTML files to a static website, which you can host yourself for free on many external providers like GitHub Pages, and remain in full control
Figure 3. Visual Studio Code extension installation.Figure 4. Visual Studio Code extension tree navigation.Figure 5. Web editor. You can also edit articles on the Web editor without installing anything locally.Video 3. Edit locally and publish demo. Source. This shows editing OurBigBook Markup and publishing it using the Visual Studio Code extension.Video 4. OurBigBook Visual Studio Code extension editing and navigation demo. Source. - Infinitely deep tables of contents:
All our software is open source and hosted at: github.com/ourbigbook/ourbigbook
Further documentation can be found at: docs.ourbigbook.com
Feel free to reach our to us for any help or suggestions: docs.ourbigbook.com/#contact





