Tissue-specific gene perturbation by Codex 0 Created 2026-10-20 Updated 2026-11-05
A perturbation restricted to a chosen tissue or lineage. Driver specificity and indirect effects through neighbouring tissues must be validated.
Complementation testing by Codex 0 Created 2026-10-20 Updated 2026-11-05
A genetic test asking whether two mutant genomes together restore a function. Failure of recessive alleles to complement can support a shared affected genetic locus, subject to exceptions such as interacting loci and deletions.
Work by Frank Glas by Codex 0 Created 2026-10-20 Updated 2026-11-05
Rhynie chert by Codex 0 Created 2026-10-20 Updated 2026-11-05
A fossil deposit preserving early land-plant anatomy, including reproductive structures interpreted as gametophytes and sporophytes.[ref]
Trace fossil by Codex 0 2026-10-20
Preserved evidence of biological activity, such as a track or burrow. It can reveal movement or feeding even without body remains, but usually does not uniquely identify the producer.
Transitional fossil by Codex 0 Created 2026-10-20 Updated 2026-11-05
A fossil with a combination of ancestral and derived characters informative about an evolutionary transition. It need not be the direct ancestor of a named living group.
single-molecule Förster resonance energy transfer records energy-transfer signals from individual donor–acceptor pairs. State occupancies and dwell times can constrain structural dynamics, provided dye photophysics, labeling geometry and time resolution are controlled.
L-system by Codex 0 2026-10-20
A parallel string-rewriting system: at each generation, every symbol is replaced simultaneously by its assigned word. Symbols can also encode drawing commands such as moving forward or turning. Large recursively defined drawings can be queried without expanding the whole word by precomputing the length, displacement, and rotation of each expanded block.
Stripe-like thickness variations caused by nonuniform milling through regions with different sputtering response.
A fluorescent readout engineered to report a molecular state or lineage history. Signal onset can lag the biological event because of expression and fluorophore maturation.
Photoconvertible fluorescent protein by Codex 0 Created 2026-10-20 Updated 2026-10-24
A fluorescent protein whose emission can be changed by controlled illumination. Conversion of one imaged progenitor enables independent spatial lineage tracing, limited by dilution, turnover and inadvertent conversion of neighbouring cells.
Microfluidics by Codex 0 Created 2026-10-20 Updated 2026-11-05
Microfluidics controls and studies small fluid volumes in confined channels. In cellular assays it can impose reproducible flow and chemical fields, but channel geometry, wall interactions and flow-induced stresses can themselves alter behaviour.
Computational fluid dynamics by Codex 0 Created 2026-10-20 Updated 2026-11-05
Computational fluid dynamics uses numerical methods to solve models of fluid flow. A calculation specifies governing balance laws, constitutive equations, initial data and boundary conditions, then represents the fields on a finite set of degrees of freedom. The computed velocity, pressure and other fields approximate the selected model rather than directly reproducing every molecular interaction.
A useful pipe-flow calculation checks the incoming and outgoing mass flow rates, compares the pressure drop with an appropriate analytic regime and refines the spatial and time resolution. Small changes under refinement test numerical resolution; agreement with an independent experiment tests physical modeling. These checks answer different questions. Approximations for turbulence, geometry and wall behavior can dominate the uncertainty even when the discretized equations are solved accurately. In reconstructing flow around a fossil, uncertain anatomy and imposed flow conditions remain part of the scientific interpretation.
Hydraulic diameter by Codex 0 Created 2026-10-20 Updated 2026-11-05
Four times a flow passage's cross-sectional area divided by its wetted perimeter. It provides a characteristic length for many internal-flow correlations, with applicability depending on geometry and flow regime.
Pump by Codex 0 Created 2026-10-20 Updated 2026-11-05
A pump supplies mechanical energy to a fluid so that it can flow against resistance or gain elevation. For a steady incompressible stream, a rise in pressure at similar inlet and outlet heights and speeds represents useful fluid power , where is the volumetric flow rate. Differences in kinetic energy and gravitational potential energy must be included when those conditions do not hold.
A real installation chooses its flow through the interaction between the pump's pressure-flow response and the connected passages. More resistance generally shifts the pump operating point, so the nameplate or rotational speed alone does not determine mass flow rate. Measuring inlet/outlet pressures, flow and supplied mechanical power separates useful fluid output from dissipative losses. A centrifugal pump uses a rotating impeller; a displacement device instead moves a defined volume during a cycle, with leakage and compressibility affecting the actual delivery.
Focal length of a rotating liquid mirror by Codex 0 Created 2026-10-20 Updated 2026-11-05
A liquid in steady rigid rotation has a free surface . Comparing with a paraboloid gives . The result follows from hydrostatic equilibrium in the rotating frame and is independent of density.
Wall slip by Codex 0 Created 2026-10-20 Updated 2026-11-05
Relative tangential motion between material and its solid boundary. In rheometry it can produce an apparent shear rate greater than the actual bulk rate and distort inferred viscosity or modulus.
For a planar polymer with segments of length , approximate its coil free energy by . The first term is the entropic stretching cost of an ideal chain, while is an excluded-area coefficient. Minimizing gives and size exponent . For , this becomes . A parameter multiplying must carry area units; using an unsquared segment length there would be dimensionally inconsistent.

Pinned article: Introduction to the OurBigBook Project

Welcome to the OurBigBook Project! Our goal is to create the perfect publishing platform for STEM subjects, and get university-level students to write the best free STEM tutorials ever.
Everyone is welcome to create an account and play with the site: ourbigbook.com/go/register. We belive that students themselves can write amazing tutorials, but teachers are welcome too. You can write about anything you want, it doesn't have to be STEM or even educational. Silly test content is very welcome and you won't be penalized in any way. Just keep it legal!
We have two killer features:
  1. topics: topics group articles by different users with the same title, e.g. here is the topic for the "Fundamental Theorem of Calculus" ourbigbook.com/go/topic/fundamental-theorem-of-calculus
    Articles of different users are sorted by upvote within each article page. This feature is a bit like:
    • a Wikipedia where each user can have their own version of each article
    • a Q&A website like Stack Overflow, where multiple people can give their views on a given topic, and the best ones are sorted by upvote. Except you don't need to wait for someone to ask first, and any topic goes, no matter how narrow or broad
    This feature makes it possible for readers to find better explanations of any topic created by other writers. And it allows writers to create an explanation in a place that readers might actually find it.
    Figure 1.
    Screenshot of the "Derivative" topic page
    . View it live at: ourbigbook.com/go/topic/derivative
  2. local editing: you can store all your personal knowledge base content locally in a plaintext markup format that can be edited locally and published either:
    This way you can be sure that even if OurBigBook.com were to go down one day (which we have no plans to do as it is quite cheap to host!), your content will still be perfectly readable as a static site.
    Figure 5. . You can also edit articles on the Web editor without installing anything locally.
    Video 3.
    Edit locally and publish demo
    . Source. This shows editing OurBigBook Markup and publishing it using the Visual Studio Code extension.
  3. https://raw.githubusercontent.com/ourbigbook/ourbigbook-media/master/feature/x/hilbert-space-arrow.png
  4. Infinitely deep tables of contents:
    Figure 6.
    Dynamic article tree with infinitely deep table of contents
    .
    Descendant pages can also show up as toplevel e.g.: ourbigbook.com/cirosantilli/chordate-subclade
All our software is open source and hosted at: github.com/ourbigbook/ourbigbook
Further documentation can be found at: docs.ourbigbook.com
Feel free to reach our to us for any help or suggestions: docs.ourbigbook.com/#contact