Glycine protonation 2026-10-14
The three principal aqueous glycine forms differ by loss of one proton at each step:
Call these glycine forms , and , respectively: a cation, a zwitterion and an anion, with net electric charges , and , where is the elementary charge. specifically denotes the zwitterion, not an uncharged amino/carboxyl drawing. The first dissociation removes the carboxyl proton; the second removes a proton from the positively charged nitrogen. The chemical equilibrium changes are reversible, not three permanently separate kinds of glycine. [ref]
For all calculations and both diagrams here, explicitly stipulate the pKa values and . These are illustrative model inputs, not measurements from the glycine titration experiment or a claim of universal constants. Actual acid dissociation constants depend on temperature and on the convention used for thermodynamic activity; apparent concentration-based values also depend on ionic strength. For comparison, the inspected textbook tabulates and for glycine, which would give a different isoelectric point. [ref]
Figure 1. . Original three-state ideal glycine speciation model, with stipulated pKa values and . The structures show net electric charges , and in units of the elementary charge. Curves are calculated fractions, not measured populations. The vertical markers locate the two pKa values and the model isoelectric point . Details.
Glycine titration 2026-10-14
Adding sodium hydroxide to acidified glycine successively removes its two titratable protons. Two broad buffer solution regions appear around the two pKa values, separated by a steep pH rise near the isoelectric point. This is useful evidence for two separated acid-base chemistry steps even though the changing chemical species are invisible. In the approximation that added hydroxide only changes glycine protonation, is the added base amount of substance per initial amount of substance of glycine. Then , and correspond to , and ; endpoints are not exactly pure chemical species. [ref]
Figure 1. . Upper panel: solid curve includes self-ionization of water and dilution for of glycine with one equivalent of hydrochloric acid, titrated with sodium hydroxide. Dashed curve retains only the glycine proton inventory. Lower panel: against pH from the glycine speciation model. Both are stipulated ideal models, not laboratory data. Details.
For the solid-curve model, start with of glycine in and exactly of fully dissociated hydrochloric acid; this fixes the chloride inventory, but does not force every glycine molecule to remain . Let the sodium hydroxide concentration be and . Assume volume is additive and no other ions are present; stipulate for self-ionization of water at a temperature of . Then
Balancing all positive and negative electric charges requires
Solving this equation gives the solid curve. It remains finite at and beyond , where ignoring free hydronium and hydroxide would fail. At the first pKa, the full model gives , rather than : appreciable free hydronium makes that half-equivalent shortcut inaccurate. At the second pKa, . Known acid inventory, dilution, and thermodynamic activity assumptions are therefore part of any quantitative interpretation, not optional corrections inferred from the curve's shape.
Isoelectric point Created 2026-10-13 Updated 2026-10-20
The isoelectric point is the pH at which a specified molecule's mean net electric charge is zero. Different protonation states can still carry nonzero electric charges; their contributions cancel in the average. For the two-step glycine speciation model, this gives . Additional ionizable amino acid side chains require their own chemical equilibrium calculations; averaging every pKa is not a general rule. [ref]
Below its isoelectric point, free glycine has positive mean electric charge and an electric field drives it toward the negative electrode; above its isoelectric point, the mean electric charge is negative and the direction reverses. At its isoelectric point the charge-driven contribution vanishes. Diffusion and bulk movement of the chemical solution can still move the sample. Gel electrophoresis applies this charge dependence to separation, although protein size, shape and interactions also affect migration. The pKa values of free glycine do not determine a protein's isoelectric point: its free N-terminus, C-terminus and ionizable amino acid side chains supply a different inventory. [ref]