RE (complexity) by Ciro Santilli 35 Updated +Created
Proteome by Ciro Santilli 35 Updated +Created
Phenylalanine by Ciro Santilli 35 Updated +Created
How many "la"s does a name need to have?
Glutamine by Ciro Santilli 35 Updated +Created
Gene by Ciro Santilli 35 Updated +Created
Transposable element by Ciro Santilli 35 Updated +Created
Google Books by Ciro Santilli 35 Updated +Created
They scanned a bunch of books, and then allowed search results to hit them. They then only show a small context around the hit to avoid copyright infringement.
Bibliography:
Base pair by Ciro Santilli 35 Updated +Created
Eligius pool by Ciro Santilli 35 Updated +Created
Created by Luke Dashjr.
The pool is named after Saint Eligius, patron of miners[ref]
Eligius also means to "choose" or "chosen" in Latin: en.wiktionary.org/wiki/Eligius, same root as "to elect" in modern English presumably.
Feedback loop by Ciro Santilli 35 Updated +Created
Cell-free protein synthesis by Ciro Santilli 35 Updated +Created
Linear history vs branching by Ciro Santilli 35 Updated +Created
There are two ways to organize a project:
  • linear history
  • branched history: history with merge commits
Some people like merges, but they are ugly and stupid. Rebase instead and keep linear history.
Linear history:
5 master
|
4
|
3
|
2
|
1 first commit
Branched history:
7   master
|\
| \
6  \
|\  \
| |  |
3 4  5
| |  |
| /  /
|/  /
2  /
| /
1/  first commit
Here commits 6 and 7 are the so called "merge commits":
  • they have multiple parents:
    • 6 has parents 3 and 4
    • 7 has parents 5 and 6
  • they are useless and don't contain any real information
Which type of tree do you think will be easier to understand and maintain?
????
????????????
You may disconnect now if you still like branched history.
Phylogenetic tree by Ciro Santilli 35 Updated +Created
It is important to note that due to horizontal gene transfer, the early days of life, and still bacteria to this day due to bacterial conjugation, are actually a graph and not a tree, see also: Figure "Graph of life".
Definitely have a look at: coral of life representations.
Taxonomy by Ciro Santilli 35 Updated +Created
Will we ever fully udnerstand the brain? by Ciro Santilli 35 Updated +Created
The Final Encyclopedia by Ciro Santilli 35 Updated +Created
Pinned article: ourbigbook/introduction-to-the-ourbigbook-project
Welcome to the OurBigBook Project! Our goal is to create the perfect publishing platform for STEM subjects, and get university-level students to write the best free STEM tutorials ever.
Everyone is welcome to create an account and play with the site: ourbigbook.com/go/register. We belive that students themselves can write amazing tutorials, but teachers are welcome too. You can write about anything you want, it doesn't have to be STEM or even educational. Silly test content is very welcome and you won't be penalized in any way. Just keep it legal!
Video 1.
Intro to OurBigBook
. Source.
We have two killer features:
  1. topics: topics group articles by different users with the same title, e.g. here is the topic for the "Fundamental Theorem of Calculus" ourbigbook.com/go/topic/fundamental-theorem-of-calculus
    Articles of different users are sorted by upvote within each article page. This feature is a bit like:
    • a Wikipedia where each user can have their own version of each article
    • a Q&A website like Stack Overflow, where multiple people can give their views on a given topic, and the best ones are sorted by upvote. Except you don't need to wait for someone to ask first, and any topic goes, no matter how narrow or broad
    This feature makes it possible for readers to find better explanations of any topic created by other writers. And it allows writers to create an explanation in a place that readers might actually find it.
    Figure 1.
    Screenshot of the "Derivative" topic page
    . View it live at: ourbigbook.com/go/topic/derivative
    Video 2.
    OurBigBook Web topics demo
    . Source.
  2. local editing: you can store all your personal knowledge base content locally in a plaintext markup format that can be edited locally and published either:
    • to OurBigBook.com to get awesome multi-user features like topics and likes
    • as HTML files to a static website, which you can host yourself for free on many external providers like GitHub Pages, and remain in full control
    This way you can be sure that even if OurBigBook.com were to go down one day (which we have no plans to do as it is quite cheap to host!), your content will still be perfectly readable as a static site.
    Figure 5. . You can also edit articles on the Web editor without installing anything locally.
    Video 3.
    Edit locally and publish demo
    . Source. This shows editing OurBigBook Markup and publishing it using the Visual Studio Code extension.
    Video 4.
    OurBigBook Visual Studio Code extension editing and navigation demo
    . Source.
  3. https://raw.githubusercontent.com/ourbigbook/ourbigbook-media/master/feature/x/hilbert-space-arrow.png
  4. Infinitely deep tables of contents:
    Figure 6.
    Dynamic article tree with infinitely deep table of contents
    .
    Descendant pages can also show up as toplevel e.g.: ourbigbook.com/cirosantilli/chordate-subclade
All our software is open source and hosted at: github.com/ourbigbook/ourbigbook
Further documentation can be found at: docs.ourbigbook.com
Feel free to reach our to us for any help or suggestions: docs.ourbigbook.com/#contact