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A dopaminergic neuron is a neuron that uses dopamine as a neurotransmitter. The term identifies a chemical signalling property, not a unique shape, firing pattern or psychological experience. A receiving cell's dopamine receptor is different from the dopaminergic neuron that supplies its ligand.
A motivating experiment recorded dopamine-neuron activity while monkeys learned a delayed-response task. A 1993 study found phasic responses to liquid-reward delivery in of neurons during learning, compared with of after task performance was established. Instruction and trigger cues also evoked responses.[ref]
Responses of monkey dopamine neurons to reward and conditioned stimuli during successive steps of learning a delayed response task by Wolfram Schultz and others. Abstract; learning versus established performance, reward and conditioned cues
These are comparisons of reported samples, not proof that the identical neurons were tracked through both populations.The outcome shows why neurotransmitter identity does not determine a response to every event. Timing, learning and task context matter. Nor does a brief change in action potential frequency directly measure the amount of dopamine released at every terminal. Interpreting a recorded cell as a dopaminergic neuron requires an identification method, and evidence from one sampled population should not be generalized to all such neurons.
Burst firing is a pattern in which a neuron emits groups of closely spaced action potentials, separated by longer gaps. A burst criterion must specify the relevant timescale: an interspike interval counted as short in one preparation need not define a burst in another. A burst can arise from intrinsic membrane dynamics, coordinated inputs, or their interaction.
An invented spike train makes the distinction quantitative. Put five spikes at milliseconds and five more at milliseconds. There are ten spikes in the one-second observation window, as in a tonic train, but most within-cluster interspike intervals are milliseconds and the gap between clusters is milliseconds. Mean count rate alone loses this organization.
A 2018 study combined recordings, pharmacology and modelling of lateral habenula neurons in rodent preparations. It linked bursting under its experimental conditions to NMDA receptors and T-type calcium channels, and manipulated firing mode by changing membrane conditions.[ref]
Ketamine blocks bursting in the lateral habenula to rapidly relieve depression by Yan Yang and others. Abstract, Figures2–4 and Extended Data Figure6
This is a mechanism tested in particular cells and preparations, not a definition requiring those exact channels in every bursting neuron.Tonic firing is a sustained pattern of individual action potentials rather than brief, separated clusters characteristic of burst firing. In a specified preparation it may be relatively regular, but tonic does not require perfectly equal interspike intervals or one universal firing frequency. The term concerns timing, not a permanently fixed identity of the neuron.
For an invented one-second recording, ten action potentials at seconds give a mean count rate of and consecutive interspike intervals of seconds. Two clusters containing five spikes each can have the same total count with very different intervals. The average rate therefore does not specify whether a train is tonic or bursting.
Recordings from the lateral habenula in a 2018 study distinguished tonic and bursting modes and examined changes associated with membrane potential and receptor-dependent currents.[ref]
Ketamine blocks bursting in the lateral habenula to rapidly relieve depression by Yan Yang and others. Figures2–4 and Extended Data Figure6; firing modes, current manipulations and model comparisons
The same cell can change its temporal pattern under changed conditions. This illustrates why a firing-mode label must be attached to the recorded interval and experimental state, rather than inferred solely from the cell's name.Piriformis syndrome is a clinical syndrome in which pain, sometimes with numbness or radiating leg symptoms, is attributed to irritation or compression of the sciatic nerve near the piriformis muscle. The nerve and muscle lie close together in the deep buttock region, making a mechanical interaction anatomically plausible.[ref]
Piriformis syndrome in the MedlinePlus Medical Encyclopedia. Definition, causes and sciatic-nerve course
Anatomical plausibility is not proof of the explanation in a particular case. A 2018 study reviewed magnetic resonance imaging and clinical records to compare people with usual and variant relationships between the sciatic nerve and piriformis muscle. It found no significant difference in the recorded frequency of piriformis syndrome, buttock pain or sciatic symptoms between the anatomical groups.[ref]
Is it painful to be different? Sciatic nerve anatomical variants on MRI and their relationship to piriformis syndrome by Adam L. Bartret and others. Abstract: retrospective cohort, MRI classification and negative association result
The study illustrates why an unusual scan finding must be distinguished from demonstrated symptomatic nerve compression.Myelination forms layers of myelin around segments of an axon. Oligodendrocytes produce these sheaths in the central nervous system, while Schwann cells do so in the peripheral nervous system. Gaps, each called a node of Ranvier, allow action potentials to be regenerated between insulated segments, supporting saltatory conduction.
The arrangement affects when signals reach their targets, not just whether an axon is present. In mice, altered visual experience shortened segments wrapped in myelin along the optic nerve pathway and was associated with slower conduction along the optic nerve. The observations connected environmental input, myelin sheath geometry and a measured physiological consequence.[ref]
Dynamic Modulation of Myelination in Response to Visual Stimuli Alters Optic Nerve Conduction Velocity by Ainhoa Etxeberria and others. Journal of Neuroscience 36, pp. 6937–6948; visual deprivation, internode length and conduction measurements
This experimental result does not imply that more myelin always produces a uniformly faster or better-performing nervous system; segment geometry and the timing required by a circuit matter.Myelin is a multilayered wrapping of glial cell membrane around segments of an axon. Its lipid-rich layers increase electrical insulation and reduce effective membrane capacitance, helping local electric current reach the next node of Ranvier. Action potentials are regenerated at these gaps, producing saltatory conduction.[ref]
Anatomy and Physiology 2e by J. Gordon Betts and others. Sections 12.2, Myelin; 12.4, Propagation of the Action Potential
A Schwann cell makes one myelinated segment in the peripheral nervous system; an oligodendrocyte can supply segments on several axons in the central nervous system. The thickness and spacing of myelin affect signal timing. In a mouse experiment, altered visual experience changed myelin segment length and optic nerve conduction, linking experience to the physical geometry of neural transmission.[ref]
Dynamic Modulation of Myelination in Response to Visual Stimuli Alters Optic Nerve Conduction Velocity by Ainhoa Etxeberria and others. Results: visual deprivation, internode length and conduction velocity
Feeding latency is the elapsed time from a defined starting event to a defined feeding event. An experiment might measure from food presentation to an individual's first peck or to the first bird feeding in a social group. Those endpoints answer different questions. The start, the feeding criterion and the observation limit must all be specified.
In an original example, an animal feeds after without a novel object and with one nearby: the novelty-associated increase is . Another changes from to , an increase of . Comparing only the two novel-condition times reverses the ordering obtained by comparing their changes.
A group-level first-feeding time is , if denotes each member's time under that same group trial. This identity requires no independence assumption. It also shows why a group endpoint cannot be treated as though it were a measurement of every member: one early feeder determines the recorded minimum.
If recording ends after before feeding occurs, the observation is subject to right censoring: the time exceeds the recorded limit. Replacing it by an observed time of exactly , or by infinity, changes what was measured.
A finch study combined whether groups fed at all with feeding latency comparisons in familiar and novel-object conditions. Keeping those outcomes separate preserves information that an average of observed feeding times alone could lose.[ref]
Effects of domestication on neophobia: A comparison between the domesticated Bengalese finch and its wild ancestor, the white-rumped munia by Kenta Suzuki and others. Abstract and Results: feeding occurrence and latency under novel-object conditions
A novel-object test measures an animal's response to an unfamiliar object under a specified procedure. In studies of neophobia, the object can be placed near familiar food, and the observer records approach, whether feeding occurs, or feeding latency. Keeping the food familiar helps distinguish response to the object from response to an unfamiliar food itself.
One controlled comparison used Bengalese finches and white-rumped munias. All groups fed in control conditions. With novel objects present, six of seven finch groups and none of six munia groups fed during the observation period.[ref]
Effects of domestication on neophobia: A comparison between the domesticated Bengalese finch and its wild ancestor, the white-rumped munia by Kenta Suzuki and others. Responses of BFs and WRMs to novel objects: control versus novel-object conditions
This measures a difference in the task response; it does not uniquely identify its inherited or developmental cause.For an original illustrative design, compare a bird's first feeding time with familiar food alone against its first feeding time when an unfamiliar object is added nearby. Define the start of each trial and the maximum observation time beforehand. Recording both approach and actual feeding can distinguish a bird that investigates without eating from one that never approaches.
Prior exposure can make an object familiar through habituation, and a companion's behavior can affect the result. Thus object identity, trial sequence and social group size belong in the procedure, alongside the numerical outcome. A novel-object test is an operational measurement, rather than a direct reading of subjective fear.
Weak selection is a regime of an evolutionary model in which the focal trait or interaction changes biological fitness only slightly relative to a baseline. It permits calculations close to neutral evolution. In one common evolutionary game theory convention, a payoff changes biological fitness according towhere controls the contribution of the game. Weak selection requires the payoff-dependent change to be small on the scale of baseline biological fitness.[ref]
A simple rule for the evolution of cooperation on graphs and social networks by Hisashi Ohtsuki and others. Nature 441, p. 502 and Figure 1; fitness map and definition of weak selection
For example, take and two competitors with payoffs and . Their fitnesses are and . If their chances to fill a vacancy are proportional to biological fitness, the second competitor wins with probabilityonly slightly above the neutral value . This invented calculation shows the meaning of a small selective bias. A small numerical would not ensure the same approximation if the payoffs were made enormously larger. Weak selection is also distinct from small biological population size: the strength of genetic drift and the cumulative effect of selection depend on additional features of the model.
A particle aggregate is a cluster made from multiple primary particles. Its overall dimensions and internal arrangement differ from the size and shape of the individual nanoparticles. A measurement reporting particle size must consequently identify whether it resolves individual particles, a connected cluster or an effective size inferred from its motion.
Aggregation changes accessible surface area, fluid transport and interaction with light. A compact cluster and an open, branched cluster containing the same number of particles can therefore behave differently. Some measurement conventions reserve aggregate for strongly bonded or fused particles and use agglomerate for more weakly associated particles; experimental reports should state their convention and how sample preparation affects the clusters.
A bimetallic nanocrystal is a crystalline particle containing two metallic chemical elements, with important dimensions on the nanoscale. Its atoms may form an alloy, chemically ordered regions, a core surrounded by a shell or spatially separated domains. Composition alone does not determine which arrangement is present.
For example, a gold–silver particle can expose a surface composition different from its bulk average. That affects surface chemistry and interaction with light. Establishing its structure requires complementary evidence: electron microscopy can reveal morphology, elemental mapping can locate the elements, and diffraction can constrain the crystal structure. These measurements answer different questions rather than providing interchangeable particle descriptions.
The nail matrix is the proliferative growth region near the nail root that produces material incorporated into the nail plate. Cells divide and become keratinized as the resulting plate advances towards the fingertip. It is distinct from the supporting nail bed and from the free edge already exposed beyond the fingertip.[ref]
Anatomy and Physiology 2e by J. Gordon Betts and others. §5.2, Nails, proliferating basal cells at the root and Figure 5.13
An original steady-volume model links production to motion. Let be net plate-material volume supplied per day, the plate width, its thickness and its advance speed. If material is approximately incompressible, the cross-section is uniform and losses before the free edge are negligible,For stipulated , mm and mm, the advance is 0.10 mm/day. Doubling width at the same production and thickness halves that modeled advance. These are geometric consequences of a chosen model, not universal differences between individuals.
Matrix growth and plate-advection balance also shows why a measured advance speed does not alone determine a cell-division rate. Cell size, keratinization, plate geometry and the spatial distribution of production enter the conversion from proliferation to material flow. A marker on the plate measures movement of produced material.
A primary study measured nail advance using marks in 22 healthy young adults; the reported mean fingernail rate was 3.47 mm/month and mean toenail rate 1.62 mm/month.[ref]
Growth rate of human fingernails and toenails in healthy American young adults by S. Yaemsiri and others. Abstract, Methods and Results
Those measurements establish cohort growth observations, not direct counts of mitoses in the matrix.A proposed comparison combines marked-plate displacement with measurements of plate width and thickness, keeping the observation interval and reference fold fixed. Interpreting changes in the inferred production rate requires checking the steady-geometry assumptions. The central anatomical distinction remains: the matrix supplies new material, while the mature plate records the movement and subsequent history of that material.
The nail bed is the living supporting tissue beneath the attached nail plate. Its specialized epidermal region and underlying vascular support differ from the compact dead keratinized plate above it. The blood-rich tissue beneath the plate contributes the usual pink appearance.[ref] The nail matrix near the root has the distinct growth-producing role.
This anatomy separates a material measurement from a view through that material. Light observed from a nail can depend on both the plate's optical properties and the tissue beneath it. The plate need not contain blood vessels for underlying vascular tissue to influence its appearance.
An original two-pass optical toy model writes the observed intensity as , where represents single-pass plate transmission and the fraction returned by the underlying tissue. It ignores multiple scattering and detailed geometry. With stipulated , changing from 0.8 to 0.6 changes from 0.32 to 0.18 even though the underlying tissue parameter has not changed.
The calculation illustrates an inverse-problem limitation, not a clinical colour calibration. A change in appearance can reflect the covering plate, lighting, geometry or the underlying tissue. A single colour observation does not uniquely determine one vascular quantity. Optical contribution of the nail bed should therefore be interpreted with a measurement model specifying what is illuminated and detected.
A proposed anatomical observation compares transmitted or reflected appearance with a labeled view of the plate, root and supporting region under standardized lighting. Record whether the plate is attached and which region is observed. The location of a structure and the source of the optical signal are different pieces of evidence; neither should be inferred solely from the fact that the nail looks pink.
The nail plate is the firm, keratinized material of a nail that lies over the nail bed and projects as the free edge. Its densely packed dead keratinocytes are produced through the growth process associated with the nail matrix. The plate protects the fingertip and supplies a backing surface during manipulation of small objects.[ref]
The distinction between produced material and producing tissue makes a direct growth measurement intelligible. A mark embedded in the plate moves distally as new material is produced proximally; the exposed material does not lengthen by its own cells dividing. Measuring the current free edge alone mixes growth with clipping and wear.
An original mark-displacement example observes positions 2 and 8 mm from a fixed reference fold, sixty days apart. The mean advance is mm/day. If the reference landmark moves or the mark is worn away, that calculation no longer measures the same displacement. Repeated measurements should preserve both the mark and the anatomical reference.
A primary growth study used supplied nail files to mark nails in 22 healthy young adults and measured displacement again one to three months later.[ref]
Growth rate of human fingernails and toenails in healthy American young adults by S. Yaemsiri and others. Abstract, Methods
It exemplifies following material rather than assuming that the free edge records all growth.Nail-plate material age from growth marks needs more than dividing distance by a single population-average rate. If advance varies with time, a material element's displacement is the integral of its growth history. A clipping can also contain material formed over an interval. Measurements of chemicals in a clipping therefore require position, growth and external-contamination information before being interpreted as a precisely dated exposure record.
The plate, nail bed and nail matrix are complementary parts of one apparatus: transported material, supporting tissue and the region producing much of that material. Keeping them distinct avoids assigning vascular colour or proliferative activity to the exposed plate itself.
A suppressor mutation is a second genetic change that reduces or counteracts a specified effect of another change. The resulting phenotype can move toward the original functional state while the original altered DNA sequence remains present. Suppression can act through another position in the same gene or through a different gene; recovery of one readout need not restore every property of the organism.
A constructed reading frame example makes the distinction visible. A one-nucleotide insertion changes the downstream grouping of codons. A second, later one-nucleotide deletion can restore the original grouping after the second change, because the net length change is . The sequence between the two changes can still specify different amino acids. Two additional inserted nucleotides would likewise give a net change of three, restoring phase downstream without recreating the original nucleotide sequence. Whether function recovers remains an experimental question.
Suppressor screens also identify mutations that bypass a defined regulatory phenotype. In a 2002 SecM study, mutations in 23S ribosomal RNA and ribosomal protein L22 relieved ribosome stalling. The affected positions faced the ribosomal exit tunnel constriction, linking the altered response to the environment around the nascent polypeptide.[ref]
The ribosomal exit tunnel functions as a discriminating gate by Hitoshi Nakatogawa and Koreaki Ito. Abstract, arrest-bypass mutations and tunnel-facing residues
Such a screen finds a functional relationship; by itself it does not prove that every suppressor physically contacts the original altered component. Pinned article: Introduction to the OurBigBook Project
Welcome to the OurBigBook Project! Our goal is to create the perfect publishing platform for STEM subjects, and get university-level students to write the best free STEM tutorials ever.
Everyone is welcome to create an account and play with the site: ourbigbook.com/go/register. We belive that students themselves can write amazing tutorials, but teachers are welcome too. You can write about anything you want, it doesn't have to be STEM or even educational. Silly test content is very welcome and you won't be penalized in any way. Just keep it legal!
Intro to OurBigBook
. Source. We have two killer features:
- topics: topics group articles by different users with the same title, e.g. here is the topic for the "Fundamental Theorem of Calculus" ourbigbook.com/go/topic/fundamental-theorem-of-calculusArticles of different users are sorted by upvote within each article page. This feature is a bit like:
- a Wikipedia where each user can have their own version of each article
- a Q&A website like Stack Overflow, where multiple people can give their views on a given topic, and the best ones are sorted by upvote. Except you don't need to wait for someone to ask first, and any topic goes, no matter how narrow or broad
This feature makes it possible for readers to find better explanations of any topic created by other writers. And it allows writers to create an explanation in a place that readers might actually find it.Figure 1. Screenshot of the "Derivative" topic page. View it live at: ourbigbook.com/go/topic/derivativeVideo 2. OurBigBook Web topics demo. Source. - local editing: you can store all your personal knowledge base content locally in a plaintext markup format that can be edited locally and published either:This way you can be sure that even if OurBigBook.com were to go down one day (which we have no plans to do as it is quite cheap to host!), your content will still be perfectly readable as a static site.
- to OurBigBook.com to get awesome multi-user features like topics and likes
- as HTML files to a static website, which you can host yourself for free on many external providers like GitHub Pages, and remain in full control
Figure 2. You can publish local OurBigBook lightweight markup files to either OurBigBook.com or as a static website.Figure 3. Visual Studio Code extension installation.Figure 5. . You can also edit articles on the Web editor without installing anything locally. Video 3. Edit locally and publish demo. Source. This shows editing OurBigBook Markup and publishing it using the Visual Studio Code extension. - Infinitely deep tables of contents:
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