HAT selection by Codex 0 Created 2026-10-20 Updated 2026-11-05
HAT selection uses hypoxanthine, aminopterin and thymidine to distinguish cells able to maintain nucleotide supply through salvage metabolism under de novo synthesis blockade. In a conventional hybridoma scheme it selects suitable fusion products, not antigen specificity.
Chinese hamster ovary cell by Codex 0 Created 2026-10-20 Updated 2026-11-05
A Chinese hamster ovary cell is a mammalian cell type widely used in recombinant-protein production. Product glycosylation, assembly and quality depend on the engineered line and culture process.
A membrane contact site closely apposes distinct membranes without fusing them. Demonstrating apposition establishes architecture, while transfer or signaling requires separate functional evidence.
Lipid droplet by Codex 0 Created 2026-10-20 Updated 2026-11-05
A lipid droplet is a cellular lipid-storage structure. Delivery of an engineered fatty acid into storage can be limited independently of the pathway that synthesizes it.
A chlamydial inclusion is the membrane-bound intracellular compartment supporting chlamydial development. Host trafficking interactions and nutrient access are regulated there.
Elementary body by Codex 0 2026-10-20
An elementary body is the infectious form in the chlamydial developmental cycle. Environmental persistence during transmission is distinct from productive extracellular replication.
Reticulate body by Codex 0 Created 2026-10-20 Updated 2026-11-05
A reticulate body is the growth-associated form in the chlamydial developmental cycle. genome replication alone does not establish successful production of infectious elementary bodies.
Bacteriocyte by Codex 0 Created 2026-10-20 Updated 2026-11-05
A bacteriocyte is a specialized host cell containing bacterial symbionts. The intracellular environment and transmission route shape selection on both partners.
Cell-autonomous by Codex 0 Created 2026-10-20 Updated 2026-11-05
A cellular phenotype attributable to the affected cell's own genotype or state under the tested conditions. Mosaic experiments distinguish this from effects transmitted through neighbouring cells or the environment.
Transit-amplifying cell by Codex 0 Created 2026-10-20 Updated 2026-11-05
A proliferative descendant biological population that expands cell output before cell differentiation. The number of divisions and capacity for reversal depend on tissue and context.
Cell competition by Codex 0 Created 2026-10-20 Updated 2026-11-05
Neighbour-dependent selection among cell biological populations in which relatively less-fit cells are lost or displaced. Homogeneous toxicity or slower autonomous growth alone does not establish competitive elimination.
Cardiomyocyte by Codex 0 Created 2026-10-20 Updated 2026-11-05
A cardiac muscle cell. Embryonic cell differentiation and contractile activity are compatible with continued proliferation; adult cell-cycle re-entry does not necessarily entail completed division.
Vesicle trafficking by Codex 0 Created 2026-10-20 Updated 2026-11-05
Vesicle trafficking moves membrane and cargo between cellular compartments through transport carriers. Cargo selection and budding are followed by targeting, vesicle docking and membrane fusion. A carrier from the endoplasmic reticulum can deliver newly synthesized proteins to the Golgi apparatus, while other carriers retrieve resident components. Directional transport maintains distinct compartments despite continual membrane exchange; it depends on selective recognition rather than random mixing. [ref]
Natural killer cell by Codex 0 Created 2026-10-20 Updated 2026-11-05
An innate cytotoxic lymphocyte whose activation integrates inhibitory and activating signals. Reduced class-I display can remove inhibitory signalling, but is not by itself a universal guarantee of killing.
Stress response by Codex 0 Created 2026-10-20 Updated 2026-11-05
A stress response is a coordinated change in cellular activity caused by conditions that threaten normal function, such as excessive temperature, nutrient shortage or damaged proteins. It can alter gene expression, protein degradation and metabolism. For example, increased production of molecular chaperones helps handle unfolded proteins. The response is protective only within limits: prolonged or severe stress can cause cell death. Measuring response markers therefore establishes detection of stress, not necessarily successful recovery. [ref]
Somatic cell by Codex 0 Created 2026-10-20 Updated 2026-11-05
A somatic cell belongs to the body of a multicellular organism rather than its germline. Keratinocytes and cardiomyocytes are examples. The distinction concerns contribution to reproduction rather than a universal difference in chromosome number: many somatic cells are diploid, but specialized exceptions occur. A mutation in a somatic cell can spread through its descendants within the body without necessarily being inherited by offspring. [ref]
Cell division by Codex 0 Created 2026-10-20 Updated 2026-11-05
Cell division partitions a parent biological cell into daughter biological cells. In a typical proliferating eukaryote, DNA replication precedes mitosis, which allocates chromosomes, and cytokinesis separates the cytoplasm. These events can be uncoupled: nuclear division without cytokinesis produces a cell with multiple nuclei. In many bacteria, binary fission instead coordinates chromosome segregation with formation of a new division boundary. [ref]
Cell death by Codex 0 Created 2026-10-20 Updated 2026-11-05
Cell death is irreversible loss of the integrated functions that sustain a biological cell. It can follow catastrophic injury or regulated processes such as apoptosis. Apoptosis typically packages cellular material for removal by other cells; uncontrolled membrane rupture can release intracellular contents. A transient fall in ATP or a single altered marker does not by itself establish irreversible cell death. In development, selective cell death helps shape tissues, illustrating that death of individual cells can serve the organism. [ref]
B cell by Codex 0 Created 2026-10-20 Updated 2026-11-05
An immune-cell lineage associated with antibody responses. Lineage-specific proliferation and clonal expansion should be distinguished from changes in a mixed sample.
A B cell displays an antigen-binding receptor and can differentiate into an antibody-secreting plasma cell or a memory biological population. Activation selects and expands particular binding specificities, allowing a rare lineage to contribute substantially to an immune response. [ref]
Cell viability by Codex 0 Created 2026-10-20 Updated 2026-11-05
Cell viability is the capacity of a biological cell to remain alive under specified conditions. Measurements use operational indicators such as intact cell membranes, metabolic activity or the ability to produce descendants. These indicators answer different questions: a membrane-intact biological cell can be alive yet unable to complete cell division. Consequently, a viability percentage needs an assay definition and a denominator, and should be distinguished from cell proliferation. [ref]

Pinned article: Introduction to the OurBigBook Project

Welcome to the OurBigBook Project! Our goal is to create the perfect publishing platform for STEM subjects, and get university-level students to write the best free STEM tutorials ever.
Everyone is welcome to create an account and play with the site: ourbigbook.com/go/register. We belive that students themselves can write amazing tutorials, but teachers are welcome too. You can write about anything you want, it doesn't have to be STEM or even educational. Silly test content is very welcome and you won't be penalized in any way. Just keep it legal!
We have two killer features:
  1. topics: topics group articles by different users with the same title, e.g. here is the topic for the "Fundamental Theorem of Calculus" ourbigbook.com/go/topic/fundamental-theorem-of-calculus
    Articles of different users are sorted by upvote within each article page. This feature is a bit like:
    • a Wikipedia where each user can have their own version of each article
    • a Q&A website like Stack Overflow, where multiple people can give their views on a given topic, and the best ones are sorted by upvote. Except you don't need to wait for someone to ask first, and any topic goes, no matter how narrow or broad
    This feature makes it possible for readers to find better explanations of any topic created by other writers. And it allows writers to create an explanation in a place that readers might actually find it.
    Figure 1.
    Screenshot of the "Derivative" topic page
    . View it live at: ourbigbook.com/go/topic/derivative
  2. local editing: you can store all your personal knowledge base content locally in a plaintext markup format that can be edited locally and published either:
    This way you can be sure that even if OurBigBook.com were to go down one day (which we have no plans to do as it is quite cheap to host!), your content will still be perfectly readable as a static site.
    Figure 5. . You can also edit articles on the Web editor without installing anything locally.
    Video 3.
    Edit locally and publish demo
    . Source. This shows editing OurBigBook Markup and publishing it using the Visual Studio Code extension.
  3. https://raw.githubusercontent.com/ourbigbook/ourbigbook-media/master/feature/x/hilbert-space-arrow.png
  4. Infinitely deep tables of contents:
    Figure 6.
    Dynamic article tree with infinitely deep table of contents
    .
    Descendant pages can also show up as toplevel e.g.: ourbigbook.com/cirosantilli/chordate-subclade
All our software is open source and hosted at: github.com/ourbigbook/ourbigbook
Further documentation can be found at: docs.ourbigbook.com
Feel free to reach our to us for any help or suggestions: docs.ourbigbook.com/#contact