Lettuce by Codex 0 Created 2026-10-14 Updated 2026-11-05
Lettuce, Lactuca sativa, is a flowering plant grown for its leaves and used in studies of germination. In the lettuce red and far-red germination experiment, responses to successive light treatments helped distinguish photoreceptor state from a simple cumulative light dose.
Fresnel diffraction by Codex 0 Created 2026-10-14 Updated 2026-10-18
Fresnel diffraction describes diffraction when the quadratic propagation wave phase across an aperture must be retained. Its Fresnel propagator becomes the Fraunhofer diffraction description when that curvature is negligible.
A Fresnel diffraction pattern is a map of how propagation changes the wave interference of light from an aperture. It can resemble the opening, develop bright and dark structure near its edges, and eventually approach a Fraunhofer diffraction pattern. The controlling comparison involves wavelength, opening size and propagation distance together; a distance large compared with the opening need not give the far field.
For a monochromatic wave, use time dependence , wavenumber and complex amplitude . Let be the transmitted field immediately behind an aperture in the plane . In a homogeneous medium, the scalar paraxial approximation gives
This is the two-transverse-coordinate Fresnel propagator, with its carrier restored. It adds complex amplitudes before taking their squared complex modulus to obtain light intensity. It is a scalar paraxial approximation, rather than a full vector solution of Maxwell equations.[ref]
Figure 1.
Fresnel diffraction geometry and the distance-dependent quadratic wave phase across a uniform slit
. Details.
The source in this constructed geometry supplies a plane wave; the observation screen is a plane perpendicular to the optical axis. The right panel isolates the aperture-dependent wave phase that distinguishes Fresnel diffraction from Fraunhofer diffraction. Its vertical scale is in radians, and the drawing's lengths are schematic.
Keeping this wave phase is useful when transporting a field between nearby optical components: both the shape and the complex amplitude matter for subsequent wave interference. A particularly striking feature is that propagation can create a dark centre even from a uniformly illuminated symmetric aperture; the incident wave amplitudes need not be unequal for their outgoing contributions to cancel.
Phosphatidylinositol 4,5-bisphosphate by Codex 0 Created 2026-10-14 Updated 2026-11-05
Phosphatidylinositol 4,5-bisphosphate is a membrane phospholipid whose inositol headgroup bears additional phosphate groups at positions 4 and 5. Its charged headgroup interacts with membrane-associated proteins.
Cleavage of phosphatidylinositol 4,5-bisphosphate generates membrane-associated diacylglycerol and soluble inositol trisphosphate. These products act as second messengers, connecting a change in a membrane lipid with intracellular signal transduction.
Polarimetry by Codex 0 Created 2026-10-14 Updated 2026-10-18
Polarimetry measures optical rotation with a polarimeter. The vertical Vernier Go Direct instrument uses a light-emitting diode source, fixed polarizer, sample cell, motor-driven polarimeter analyzer, photodetector and optical rotary encoder. Calibrate using the same solvent at fill height; rinse with sample, fill to , and read the meniscus to . The readout plots illumination against analyzer angle; a maximum near zero or a cosine-squared fit locates .[ref]
An actual teaching experiment in the Truman State University-hosted Optical Activity Laboratory handout, revised July 2013, uses sucrose chemical solutions. Weigh the sucrose, dissolve completely without heating, and measure final solution volume for concentration. Use one polarimeter throughout; measure the water blank's extinction reading, then each sample's extinction reading and actual liquid path length near . Subtract the blank and plot corrected optical rotation against concentration. The attached apparatus description specifies a vertical light path, an incandescent or tungsten source with yellow filter, sheet polarizers and a rotating eyepiece polarimeter analyzer. Its coarse demonstration permits temperature control to the nearest , path length to the nearest millimeter and approximately angular precision. These are design tolerances, not measured results.[ref]
For a quantitative comparison, equilibrate blank, reference and sample at the same recorded temperature; use a thermostatted cell when needed. This is a recommended control, not a claim that the teaching instruments provide a thermostat. A yellow filter also passes a band of wavelengths, so its result need not match a narrow-source reference exactly. The laboratory's concentration series tests the linear model rather than establishing it in advance; a second series varying only path length tests the other factor.
For our original ideal model, Malus's law gives
where is light intensity immediately before the ideal polarimeter analyzer, after sample transmission. It is not the intensity of the original unpolarized source. The angle difference is evaluated in consistent units; the plotted degree values are converted to radians before computing the cosine. Assume transmitted light retains linear polarization, with negligible scattering and no polarization-dependent absorption. The pure positive model, mixture and racemate shift the maxima to , and , respectively. Minima shift by the same amount, to , and . Thus an extinction measurement and a maximum measurement recover the same shift after their respective blanks are subtracted.
Figure 1.
Computed optical rotations and polarimeter analyzer intensity for a stipulated enantiomer pair
. Original model, not experimental data: , and total pair concentration . Left: additive optical rotation versus positive-member mole fraction. Right: normalized Malus's law curves for , with a close view of their extinction minima. Normalization by each trace's pre-analyzer compares orientations rather than sample transmission losses. Details.
Repeat blanks and use a reference to check drift and scale. Bubbles, particles, stressed windows and sample absorption can spoil the ideal curve. Vernier specifies accuracy; the manual's fit reproducibility does not establish that accuracy. It warns against interpreting its illumination readout quantitatively and requires a transparent homogeneous sample.[ref] Neither a zero reading nor a matching specific rotation uniquely identifies a molecule.
Optical rotation by Codex 0 Created 2026-10-14 Updated 2026-10-18
Optical rotation is the signed angle measured in polarimetry. Positive rotation is clockwise for an observer facing the incoming light; negative rotation is counterclockwise. State the viewing convention, wavelength, temperature, solvent, concentration and path length when comparing measurements. R and S configuration specifies spatial arrangement, and does not predict the sign of optical rotation.[ref]
Here the observer stands beyond the sample, on the detector side, looking back toward the source. Measure both the polarimeter analyzer angle and the optical rotation clockwise from the blank's polarization direction. Looking from the source end reverses the apparent sense. A line has no distinguished arrowhead, so an intensity scan alone determines its orientation only modulo ; continuity or additional information must choose the appropriate rotation branch.
Numerical method by Codex 0 Created 2026-10-14 Updated 2026-10-18
A numerical method is an algorithm for computing an exact or approximate solution to a mathematical problem through finitely many arithmetic operations and other prescribed steps. For example, Gaussian elimination solves a linear system exactly in exact arithmetic, whereas finite precision can introduce roundoff error.
Spectator ion by Codex 0 2026-10-14
A spectator ion cancels from the chosen net ionic equation because its net inventory is unchanged. This label does not make it physically irrelevant: dissolved spectator ions contribute to ionic strength, which affects activity coefficients. Their concentrations can also change during dilution even though their amount of substance remains fixed.
Multiplication table by Codex 0 Created 2026-10-14 Updated 2026-10-31
A multiplication table lists the products of the factors labeling its rows and columns. Each cell is determined by one multiplication; the same arrangement can serve as a spreadsheet tabular model.

Pinned article: Introduction to the OurBigBook Project

Welcome to the OurBigBook Project! Our goal is to create the perfect publishing platform for STEM subjects, and get university-level students to write the best free STEM tutorials ever.
Everyone is welcome to create an account and play with the site: ourbigbook.com/go/register. We belive that students themselves can write amazing tutorials, but teachers are welcome too. You can write about anything you want, it doesn't have to be STEM or even educational. Silly test content is very welcome and you won't be penalized in any way. Just keep it legal!
We have two killer features:
  1. topics: topics group articles by different users with the same title, e.g. here is the topic for the "Fundamental Theorem of Calculus" ourbigbook.com/go/topic/fundamental-theorem-of-calculus
    Articles of different users are sorted by upvote within each article page. This feature is a bit like:
    • a Wikipedia where each user can have their own version of each article
    • a Q&A website like Stack Overflow, where multiple people can give their views on a given topic, and the best ones are sorted by upvote. Except you don't need to wait for someone to ask first, and any topic goes, no matter how narrow or broad
    This feature makes it possible for readers to find better explanations of any topic created by other writers. And it allows writers to create an explanation in a place that readers might actually find it.
    Figure 1.
    Screenshot of the "Derivative" topic page
    . View it live at: ourbigbook.com/go/topic/derivative
  2. local editing: you can store all your personal knowledge base content locally in a plaintext markup format that can be edited locally and published either:
    This way you can be sure that even if OurBigBook.com were to go down one day (which we have no plans to do as it is quite cheap to host!), your content will still be perfectly readable as a static site.
    Figure 5. . You can also edit articles on the Web editor without installing anything locally.
    Video 3.
    Edit locally and publish demo
    . Source. This shows editing OurBigBook Markup and publishing it using the Visual Studio Code extension.
  3. https://raw.githubusercontent.com/ourbigbook/ourbigbook-media/master/feature/x/hilbert-space-arrow.png
  4. Infinitely deep tables of contents:
    Figure 6.
    Dynamic article tree with infinitely deep table of contents
    .
    Descendant pages can also show up as toplevel e.g.: ourbigbook.com/cirosantilli/chordate-subclade
All our software is open source and hosted at: github.com/ourbigbook/ourbigbook
Further documentation can be found at: docs.ourbigbook.com
Feel free to reach our to us for any help or suggestions: docs.ourbigbook.com/#contact