Action potential 2026-10-13
An action potential is a brief regenerative excursion of membrane potential, produced by changing electrical resistance and conductance through voltage-gated ion channels. In a typical fast neuronal action potential, sodium entry raises membrane potential, activating further sodium channels. This feedback produces the rapid rising phase. Inactivation of sodium channels and increased conductance to potassium then lower membrane potential again; persisting potassium conductance can produce an undershoot below the resting level. See Purves and colleagues: the ionic basis of action potentials.
For an illustrative electrical calculation, write inward sodium electric current as . At , taking and gives inward. A potassium current with and gives , outward. These illustrative values expose opposing driving forces; a waveform requires the conductances to evolve with membrane potential and time, as in the Hodgkin-Huxley model.
An action potential propagates along an axon because local electric currents bring neighboring regions of cell membrane into the regime where their voltage-gated ion channels regenerate the signal. It is a traveling pattern of excitation, not a packet of sodium ions traversing the entire axon. Regeneration allows an action potential to travel without the passive attenuation of a small local voltage change. See Ion Channels and the Electrical Properties of Membranes.
The neuronal refractory period constrains how soon another action potential can follow. Under comparable conditions, successive action potentials have roughly stereotyped shapes, making event count and timing useful for neural coding; waveform details can nevertheless change with channel state and conditions. The leaky integrate-and-fire model abstracts each action potential to a threshold event and reset. Its reset jump is a mathematical rule, not the actual regenerative waveform produced by sodium and potassium currents.
Axon 2026-10-13
A neuronal process that carries signals toward output sites, often by propagation of action potentials to synapses.
Axon initial segment 2026-10-13
The axon initial segment is the specialized proximal region of an axon near the soma. In many neurons, its voltage-gated ion channels make it the site where an action potential begins. [ref]
Current clamp 2026-10-13
Current clamp prescribes injected electric current while recording membrane potential. A constant command does not force membrane potential to remain constant: a neuron can produce action potentials or synaptic potentials while that command is unchanged. At zero commanded electric current, the amplifier still measures membrane potential; intrinsic ionic electric currents continue. The name concerns current supplied by the instrument, not the cancellation of all currents in the biological cell.
In whole-cell recording, the measured pipette voltage during a current pulse includes the patch-clamp series resistance drop. A modern authored methods article explicitly describes current-pulse protocols and this distortion.[ref] Check the access contribution with small pulses and distinguish the immediate pipette-voltage jump from the slower membrane capacitance response. A zero-input interval measures a baseline, not proof that the instrument has no voltage offset. The passive example below explains these distinctions without asserting any new physiological measurements.
Depolarization 2026-10-13
For a negative neuronal membrane potential, depolarization raises it toward zero or beyond, making the interior less negative relative to the exterior. This describes a voltage change, not necessarily increased action potential generation; see the depolarizing inhibition example under synaptic potential.
Extracellular single-unit recording uses an electrode outside a neuron to detect electrical events attributed to that unit's action potentials. It records a spike train, not the intracellular membrane potential or every input synapse. [ref]
Hodgkin-Huxley model 2026-10-13
A conductance-based Hodgkin-Huxley model couples membrane potential to voltage-dependent channel-gating variables. It explains generation of action potentials through regenerative and opposing ionic electric currents, while its parameters and channel assumptions determine its biological domain of validity.
In the classical model, describes sodium activation, describes availability against sodium inactivation, and describes potassium activation. Each follows two-state ion-channel gating, with its own voltage-dependent rates. The available electrical conductances are
The barred quantities are maximum electrical conductances. The factors have the interpretation of independent permissive gates in an ion channel: three activation factors and a distinct inactivation-availability factor for sodium, and four identical activation factors for potassium. Large means availability; small means inactivation. These are model assumptions, not a literal structural description of every ion channel. See Gerstner, Kistler, Naud and Paninski, Neuronal Dynamics (2014), §2.2: model definition and stochastic opening.
With inward-positive electric current, a single-compartment form is
Here is membrane capacitance, is imposed inward electric current, is leak electrical conductance, and each is a reversal potential. Use consistent units, and either whole-compartment quantities throughout or quantities per membrane area throughout. Opening changes electrical conductance; the reversal potential and present membrane potential determine the associated electric current. Coupling this equation to the voltage-dependent gates makes a generally nonlinear system of ordinary differential equations; a gate's fixed-voltage limit alone does not specify its evolving state during an action potential.
The original quantitative account is [ref]. The contrast with the leaky integrate-and-fire model is useful: here an action potential emerges from evolving ionic electric currents, whereas the simpler model records a threshold event and imposes a reset.
Ionotropic receptor 2026-10-13
An ionotropic receptor is a receptor in which binding of a ligand directly gates an ion channel within the same protein complex. The binding site detects the chemical signal; the pore supplies a path across the cell membrane. At a chemical synapse, a neurotransmitter therefore changes synaptic conductance without an obligatory intervening G protein or second messenger. [ref]
A familiar example is the nicotinic acetylcholine receptor of skeletal muscle: acetylcholine binding opens a pore passing cations, including sodium and potassium. The muscarinic acetylcholine receptor instead uses intracellular signal transduction; the same neurotransmitter can engage different mechanisms. Direct gating does not mean that an ionotropic receptor pumps ions: electrochemical gradients drive passage through the open ion channel. Nor does “ionotropic” specify excitation. The reversal potential, initial membrane potential and other conductances determine whether the effect favors an action potential, causes hyperpolarization, or supplies shunting inhibition. [ref]
A concrete electrical approximation separates opening from drive. Let identical ion channels each have open-channel electrical conductance and opening probability . At fixed membrane potential , with common reversal potential , the expected value of inward-positive electric current is
For stipulated values , , , and , the mean open count is , the population electrical conductance is and . One open ion channel carries . These are illustrative values, not measurements. At , the net electric current vanishes despite open ion channels; neither binding nor opening alone determines the readout. The approximation omits changes in ion concentrations and voltage-dependent open-channel electrical conductance.
Figure 1. . Original mechanism cartoons, not molecular structures or measured pathways. Solid blue arrows show one possible net movement of positive ions when the electrochemical gradient favors entry; dashed orange arrows relay a signal. In the first panel binding and pore functions belong to one protein complex. In the other panels a separate ion channel is regulated through a G protein, either locally or through an enzyme, inositol trisphosphate and stored calcium. Positions, shapes and arrow lengths encode no measured distances or times. Details.
A motivating experiment made the elementary electrical events visible. As Bert Sakmann recounts, chronically denervated frog muscle fibers had acetylcholine-sensitive receptors spread beyond the original nerve contact. Mild enzyme treatment exposed the cell membrane; a polished glass pipette sealed over a small patch to reduce background noise. Two intracellular electrodes held the local membrane potential through voltage clamp, while the patch pipette recorded tiny electric currents. Applying suberyldicholine, a ligand that activates the acetylcholine receptor and prolongs openings, revealed abrupt, approximately rectangular current events. Their amplitudes agreed reasonably with estimates from whole-membrane current fluctuations. This established discrete opening and closing events; it did not make every ligand response instantaneous. Background noise and finite recording bandwidth concealed sufficiently small or brief events.[ref]
Recording an intact membrane patch alone does not exclude intracellular relays. Tank, Huganir, Greengard and Webb supplied a complementary isolation test in 1983: they purified nicotinic acetylcholine receptors from an electric ray's electric organ, incorporated them into artificial lipid membranes, and fused small vesicles into larger vesicles by freezing and thawing. Sealed glass-pipette recordings from isolated membrane patches resolved functional ion channels with properties resembling those in muscle. Removing the intact cytoplasm and its signaling machinery supports the sufficiency of the receptor complex for channel function; an artificial lipid environment still cannot reproduce every native regulatory interaction.[ref]
Direct gating supports millisecond communication at many chemical synapses. Response duration also depends on neurotransmitter clearance, binding and channel-state transitions. Continued ligand exposure can prolong activity. Classify an ionotropic receptor by its direct connection between recognition and pore gating, rather than a universal duration cutoff. [ref]
The leaky integrate-and-fire model combines a passive equation for membrane potential with a firing rule. Between events, inward-positive applied electric current obeys
where is membrane capacitance, is the leak conductance, is the corresponding electrical resistance, and is the leak reversal potential. Here the leak conductance is constant. The time constant describes passive relaxation. When first reaches a threshold from below, record an action potential event and reset to . In the version used here, hold for a fixed neuronal refractory period , then resume integration. See 1.3 Integrate-And-Fire Models.
For constant , with at the start of an integration interval and , the exact subthreshold solution is
The equilibrium point of this passive equation is . Subtracting leaves , explaining the exponential function. This solution applies only until a threshold event or a change in . Starting below threshold, constant input produces repeated events if ; if , the threshold is approached asymptotically and never reached at finite time.
For a worked example, choose
These imply and . All these parameters are illustrative model choices, not measurements from a particular neuron. With , Ohm's law gives and hence . Thus
At threshold, , so the first event occurs after . Each subsequent cycle includes the neuronal refractory period, giving
This is the ideal sustained firing rate; the first-event latency is , not .
With instead, and . From the same initial state, stays below : no events occur, however long this current is held. The critical sustained current is ; equality gives asymptotic approach rather than finite-time firing.
Figure 1.
Exact leaky integrate-and-fire responses to two current steps
. Both inputs start at and end at . A step approaches without firing; a step produces threshold events separated by after the first. Orange ticks mark events, and shaded intervals mark the reset hold. The dashed level is the stronger input's passive equilibrium, which the reset trajectory never reaches. These are analytic model trajectories, not recordings or biological spike waveforms. Details.
The leak gives old inputs progressively less influence, while capacitance prevents an ordinary finite electric current step from changing instantly. This combination makes the leaky integrate-and-fire model useful for exploring input summation, event timing and network activity at low computational cost. Its fixed parameters and reset omit the evolving voltage-gated ion channels of the Hodgkin-Huxley model, spatial integration in dendrites and mechanisms of neural adaptation. Treating a synapse as a prescribed also omits its voltage-dependent driving force unless a conductance term is added. See 1.4 Limitations of the Leaky Integrate-and-Fire Model and constant-input firing rate of a leaky integrate-and-fire neuron.
Neuron 2026-10-13
A neuron is a specialized biological cell that receives, integrates and transmits signals. Its shape separates places where inputs arrive from places where outputs reach other biological cells: this functional asymmetry is neuronal polarity. Understanding a neuron therefore means connecting its anatomy to changes in membrane potential, rather than treating it as a wire that merely forwards every input.
In a common multipolar neuron, branching dendrites receive inputs at synapses; the soma contains the cell nucleus and most major organelles; the axon carries signals to distant or nearby targets; and axon terminals form output contacts. All these regions belong to one biological cell enclosed by a continuous cell membrane. An axon can branch, allowing one neuron to influence several receiving biological cells.[ref]
At an input chemical synapse, a neurotransmitter acts on a receptor, changing an electric current directly or through signal transduction.[ref] A resulting synaptic potential contributes to synaptic integration in the dendrites and soma. In many spiking neurons, sufficiently strong depolarization recruits voltage-gated ion channels in the axon initial segment, initiating an action potential that propagates along the axon. At an output chemical synapse, calcium entry through voltage-gated ion channels promotes synaptic vesicle exocytosis, releasing neurotransmitter. An action potential is thus regenerated electrically along a cell membrane; it is not a packet of neurotransmitter travelling from the dendrites to the axon terminals.[ref]
Figure 1.
Neuronal anatomy, usual signaling direction and alternative shapes
. Original schematic, not microscopy and not to scale. The upper multipolar neuron identifies dendrites, the soma, the cell nucleus, the axon initial segment, the axon and axon terminals. Solid arrows show a common input-to-output route; a dashed arrow indicates possible propagation of an action potential back toward dendrites. The lower sketches compare a bipolar neuron and a pseudounipolar neuron, whose soma lies off the main transmission route. Shapes and relative dimensions are illustrative. Details.
The compartments are specializations, not exclusive jobs. Inputs can contact the soma or axon as well as dendrites; dendrites can support active voltage-gated ion channels. Paired recordings from a pyramidal neuron's soma and dendrite or axon established that an action potential can begin in the axon and propagate back into the dendrites. The usual output direction therefore does not make every electrical signal strictly one-way.[ref] An electrical synapse, which directly couples cytoplasms through gap junctions, also differs from the sending-and-receiving arrangement of a chemical synapse.[ref]
Nor does every neuron have the upper diagram's shape. A bipolar neuron has two main processes, one dendrite and one axon; a multipolar neuron has several dendrites; and a pseudounipolar neuron has a single process from the soma that divides into peripheral and central branches. In the last arrangement, sensory signals can travel past the soma rather than obligatorily through it. These shape categories do not specify every neuron's receptor, connectivity or firing behavior.[ref] Some neurons in the retina communicate through graded changes in membrane potential without generating action potentials.[ref]
Why timing changes the computation. Synaptic integration can combine inputs at different locations, called spatial summation, and inputs arriving at different times, called temporal summation. A minimal example uses the leaky integrate-and-fire model with the illustrative parameters already given there: resting and reset membrane potential , firing threshold , electrical resistance , capacitance , time constant and neuronal refractory period . These are chosen model values, not measured properties of a particular neuron. Before firing, a constant inward electric current starting from rest gives
The exponential function expresses the competition between charging the cell membrane's capacitance and leakage through its electrical resistance.[ref]
Two inputs, each lasting , produce different outputs depending on their timing. Either input alone reaches only . Applied together, they give and reach threshold after , producing one action potential event during the pulse. If instead the second input begins after the first ends, the earlier depolarization has partly decayed: the second pulse peaks at approximately and neither pulse produces an action potential. The two-input protocols deliver the same total electric charge, , yet only the coincident protocol fires. Counting total input alone misses this timing dependence.
Figure 2.
The same total input can yield different neuronal outputs
. Synthetic exact leaky integrate-and-fire model responses, not empirical recordings. A single pulse is below threshold; two coincident pulses produce one action potential event, shown as a tick rather than a biological waveform; two separated pulses deliver the same total electric charge as the coincident pair but produce no events. The lower traces show membrane potential, its reset and the brief neuronal refractory period. All inputs are prescribed electric currents in a single compartment, without a modeled synaptic conductance or spatial dendrite. Details.
This example makes a neuron a detector of sufficiently clustered input, not a perfect logical gate: different parameters change the result. Actual dendrites introduce location-dependent filtering and active responses, and an inhibitory postsynaptic potential or shunting inhibition can change whether another input succeeds. The single-compartment leaky integrate-and-fire model omits these mechanisms.[ref] Across connected neurons, branching axons distribute outputs while converging synapses combine inputs; spike trains can support temporal coding and rate coding, and synaptic plasticity changes the influence of an input. Connectivity and cellular dynamics together determine the computation.[ref][ref]
Testing the connection between structure and function. Whole-cell recording connects anatomy to a measured membrane potential. In a published mouse protocol, a two-photon microscope guides solution-filled glass pipettes to neurons; an amplifier and bath reference electrode complete the electrical recording apparatus. A high-resistance seal forms against the cell membrane, then brief suction opens the membrane patch beneath the tip. In current clamp, the amplifier supplies a chosen electric current and records the resulting membrane potential, unlike voltage clamp, which controls voltage and measures electric current. The investigators used current steps of several amplitudes to characterize excitability and firing, and negative current pulses to estimate input electrical resistance.[ref]
The observable is a voltage trace, including graded responses and action potentials. Comparing injected electric current with that trace tests how input becomes output; it does not identify every underlying ion channel. The protocol checks access electrical resistance, which can distort voltage and action potential measurements, and includes intervals without stimulation to record spontaneous activity. In a teaching replication, repeated zero-input trials and monitoring baseline drift would provide further controls; these are recommended comparisons, not additional results attributed to the paper. A recording at the soma also cannot establish the local voltage everywhere in a branching dendrite, and this anesthetized preparation does not establish behavior in every awake neuron.[ref]
A complementary experiment used simultaneous whole-cell recordings from the soma and an apical dendrite or axon of the same pyramidal neuron in a brain slice. The relative onset times of action potentials, together with sodium currents in excised dendrite membrane patches, supported axonal initiation followed by active propagation into dendrites. Pairing sites within one neuron is a useful comparison because it avoids confusing differences between cells with differences between compartments. Instrument timing and comparable recording quality would be essential controls when reproducing the inference. Only the published abstract was accessible here, so no unverified timing values, drug controls or channel distributions are supplied.[ref]