High-force worm-like chain elasticity 2026-10-14
A strongly stretched inextensible worm-like chain has two small transverse tangent components. Its quadratic energy is . For a long bulk chain, the equipartition theorem assigns each Fourier mode covariance . Integrating over and summing both components gives , hence the extension deficit is half that value. With persistence length , the deficit is . It requires small slopes and negligible stretching of the backbone.
Past exam of the mathematics course of the University of Cambridge 2003 iii Paper 71 5 b Solution Created 2026-10-03 Updated 2026-10-14
For a three-dimensional worm-like chain, the tangent correlation length is , where is the filament bending modulus. The measured persistence length therefore givesRepresent the actin filament as an isotropic solid circular cylinder with diameter . Its second moment of area is . Since ,This is an effective Young's modulus within the given continuum cross-sectional model; the numerical diameter and persistence length must not be replaced by unrelated typical biological values.
The same measurement corrects the independent-link approximation: the Kuhn length is , with . Thus the long-chain entropic stiffness is , and the root-mean-square end-to-end distance is . For comparison, the material axial stiffness is , using . The corrected coil response remains much softer than axial backbone stretching.
Past exam of the mathematics course of the University of Cambridge 2008 iii Paper 83 4 Solution Created 2026-10-03 Updated 2026-10-14
Use the arc length and the unit tangent of an inextensible filament. In the high-force state choose its positive longitudinal branch. The constraint givesThe extension is . The curvature of a space curve obeys . Since is second order in small fluctuations, its squared contribution is fourth order. Thus the worm-like chain energy through quadratic order isPositive force suppresses transverse orientation fluctuations, while the filament bending modulus penalizes their spatial variation.
To apply the equipartition theorem without missing either component or a mode-counting factor, expand each component in a real orthonormal basis of eigenfunctions of , , with and . The quadratic energy is . Each real quadratic degree of freedom contributes , soFor a chain long compared with the force-dependent correlation length, the interior is translation invariant and the mode sum per length becomes . Equivalently, for the Fourier transform ,The negative and positive wavenumbers here represent the real-field mode count consistently, rather than two independent complex modes. Summing both transverse components gives the high-force worm-like chain elasticitywhere the integral follows by setting and using . ThereforeHere is the three-dimensional zero-force persistence length. The result requires , negligible backbone stretching, and a long-chain bulk approximation. It does not describe the eventual bond-stretching regime. For a continuum polymer description, the force-dependent length should also exceed the microscopic cutoff.
For comparison, a three-dimensional freely jointed chain has contour length and independent link orientations. At force , a link of polar angle has Boltzmann factor with . Its angular canonical partition function isThe total canonical partition function is . Differentiating with respect to force gives the force-extension of a three-dimensional freely jointed chain:ConsequentlyThe extension deficits scale as and respectively. Inverting them gives force divergences proportional to the first and second inverse powers of the deficit. Freely jointed link rotations cost no bending energy; the worm-like chain instead has a continuum of coupled bending modes whose contributing wavelengths change with force. Setting a long-wavelength coarse-grained link length can match weak-force statistics, but does not make these high-force laws identical.
For the transverse tangent correlation of a stretched worm-like chain, use a separation consistently: the source writes but integrates a separation denoted . In the translation-invariant bulk the spatial average is redundant andTo evaluate the integral without an assumed decay law, let be the inverse Fourier transform of . Then . Away from zero, decay at both infinities requires with . Integrating across zero yields , so . ThusAt this agrees with the two-component equipartition theorem calculation. The correlation length decreases with force and is distinct from the zero-force persistence length. The full tangent correlation has a nonzero aligned background; the exponentially decaying quantity here is specifically the transverse correlation.
For a finite open chain, the source's integral samples beyond and supplies no endpoint tangent conditions. An exact finite-length correlation is therefore not uniquely specified. The result above is the intended bulk form when . As one explicit finite convention, periodically extending the tangent fluctuations gives the periodic finite-length tangent correlation of a stretched worm-like chainwhere is the distance from zero around the periodic interval. Then , and the extension formula acquires this same finite-length factor. The bulk law is recovered as . This makes the endpoint assumption explicit rather than claiming an unspecified finite-chain correlation is exactly translationally invariant.
Past exam of the mathematics course of the University of Cambridge 2015 iii Paper 75 2 Solution Created 2026-10-03 Updated 2026-10-06
For one small transverse displacement, the elastic energy of the elastic filament iswhere is the filament bending modulus. Its first variation isThe clamped boundary conditions remove the left boundary terms. A force-free and torque-free tip permits independent and , so the natural boundary conditions for a free endpoint are : zero bending moment and transverse shear.
There is an important distinction between an energy minimum and a normal mode. The unloaded higher-order Euler-Lagrange equation is , whose only solution with these four boundary conditions is . A general fluctuating shape is a sum of modes, not one of the stated sinusoidal/hyperbolic functions. To obtain the clamped--free bending modes, extremize the bending Rayleigh quotient, or equivalently with a fixed norm. Its Euler-Lagrange equation isThis is the constrained variational characterization of bending modes. Its four characteristic roots are . Clamping gives and , henceThe free-tip conditions reduce toIts determinant is , so nontrivial modes requireNo zero mode exists, since a cubic satisfying the homogeneous clamp/free conditions is zero. The clamped-free bending spectrum starts with ; bisection or Newton iteration gives , so . Choosing and givesThe second boundary condition follows from the root equation, and is arbitrary until a normalization is chosen.
The bending operator with these boundary conditions is positive and self-adjoint. Twice integrating by parts givesSymmetry implies orthogonality when . Expand and use . Thenby the equipartition theorem. The supplied endpoint identity therefore yields the thermal bending fluctuations of a clamped filament:To evaluate the sum, apply a tip force and minimize . The modified free-end conditions are and , and in the interior. Integration gives , so the tip-force compliance of a cantilever is . On the other hand, minimizing the modal energy minus gives and henceComparison evaluates the fourth inverse-power sum of the cantilever spectrum without truncating the modes:The boxed variance is for the specified single transverse direction. An independent equilibrium check follows by differentiating the Gaussian partition function with respect to : at zero load, reproducing the same result from the static compliance. Keeping only the first normal mode gives about , roughly of the exact variance. With two independent equivalent transverse directions, their summed variance is twice the boxed result. The small-slope model requires , or small compared with the usual three-dimensional persistence length .
Past exam of the mathematics course of the University of Cambridge 2026 iii Paper 355 3 c Solution Created 2026-09-24 Updated 2026-09-25
The quadratic energy isEach mode is a centered Gaussian, soThe variance diverges as because the first bending mode becomes soft; Gaussian theory then fails and the quartic term controls the fluctuations.
At zero force,With the common persistence length convention ,Thermal bending therefore shortens the mean projected length even without compression. Under the strictly planar tangent-correlation convention , the same result is .
The bulk tangent covariance is twice the inverse Fourier transform of , one term for each transverse direction. Equivalently the inverse of is . This gives the displayed correlation and identifies a force-dependent correlation length, different from the zero-force persistence length. Finite chains require endpoint conditions or a periodic convention.