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An ion is a chemical atom or a group of chemical atoms with a nonzero net electric charge. A positive ion is a cation; a negative ion is an anion. The whole entity carries the electric charge: a hydronium ion is a group of four chemical atoms with net charge $+e$. This definition agrees with ^[ref].

For an ordinary ion containing only atomic nuclei and Electrons, let $N_p$ count all its protons and $N_e$ all its Electrons. Each proton contributes the elementary charge $+e$, each Electron contributes $-e$, and neutrons contribute zero. ThereforeThe signed integer $z$ is the net electric charge number. Removing an Electron increases $z$ by one; adding an Electron decreases $z$ by one. Changing the Electron count leaves the atomic number, and therefore the identity of the chemical element, unchanged.

For example, a neutral sodium chemical atom has $11$ protons and $11$ Electrons. Its cation ${\mathrm{Na}}^{+}$ still has $11$ protons, but only $10$ Electrons, so $q=(11-10)e=+e$. A neutral chlorine chemical atom has $17$ protons and $17$ Electrons; its anion ${\mathrm{Cl}}^{-}$ has $17$ protons and $18$ Electrons, so $q=(17-18)e=-e$. These are particle inventories, not pictures of atomic orbitals. See 2.6 Ionic and Molecular Compounds (§2.6: ions and ionic compounds).

One sodium chloride formula unit accounts for one ${\mathrm{Na}}^{+}$ cation and one ${\mathrm{Cl}}^{-}$ anion, whose net electric charges sum to zero. Ordinary solid sodium chloride is an extended arrangement of ions, rather than discrete $\mathrm{NaCl}$ molecules. This is a useful distinction: a neutral material can contain charged constituents, and its chemical formula tells us their ratio without claiming that each pair is a separate molecule.

Ion bookkeeping connects chemistry to electric current: moving ions can transport electric charge, while stationary ions cannot supply a transport current density. In electrochemistry, both signs of ions can contribute to the same conventional current. An ion opposing a fixed electric charge is called a counterion.

An ion channel is a membrane protein that provides a selective pathway for ions across a cell membrane. An open pore permits passive transport down the relevant electrochemical gradient; it does not supply the free energy for uphill transport as a pump involved in active transport does. Two things are needed for a net electric current: an available pathway and an electrochemical potential difference. Opening a pore alone need not produce a net electric current. See Ion Channels and the Electrical Properties of Membranes.

The selective permeability of an ion channel depends on interactions between its pore and the passing ions, not simply on a hole's diameter. Some ion channels strongly favor potassium over sodium; others admit several kinds of positively charged ions. Thus selective does not necessarily mean exclusive to one ion species. See Purves et al., Neuroscience, 2nd edition (2001): molecular structure of ion channels and the mixed-channel example in Purves et al.: principles derived from studies of the neuromuscular junction.

Gating is the opening and closing of an ion channel's pathway. A voltage-gated ion channel responds to membrane potential; an ionotropic receptor can respond to a bound ligand. Gating changes the available electrical conductance, while the electrochemical gradient supplies the drive for passive transport. For a fixed reversal potential in the simple model below, opening more identical ion channels increases the magnitude of the electric current at a fixed nonzero drive, without choosing its sign independently of membrane potential. The two-state ion-channel gating model describes how the open fraction can change. See the Alberts reference above.

For a worked approximation, hold an open population's electrical conductance at $g=10\mathrm{nS}$ and its reversal potential at $E_{\mathrm{rev}}=-80\mathrm{mV}$. Use $V=V_{\mathrm{inside}}-V_{\mathrm{outside}}$ for membrane potential and inward-positive conventional current:At $V=-100,-80,-60\mathrm{mV}$, respectively, the electric currents are $+200,0,-200\mathrm{pA}$, since $1\mathrm{nS}\times 1\mathrm{mV}=1\mathrm{pA}$. Positive electric current means net positive electric charge entering, or net negative electric charge leaving; it does not mean that every ion moves inward. For a pore passing only positive ions, the three results mean net inward passage, no net passage, and net outward passage. These stipulated values describe an illustrative Ohmic approximation, not measured properties of a particular ion channel; see reversal potential for the current plot and limitations.

The useful connection is between a molecular gate and a controllable electric current. A ligand can change electrical conductance through an ionotropic receptor, or membrane potential can change it through a voltage-gated ion channel, connecting recognition and electrical signaling. In a historical landmark, Erwin Neher and Bert Sakmann reported currents from individual ion channels in frog muscle membranes in 1976. See Neher and Sakmann, Single-channel currents recorded from membrane of denervated frog muscle fibres, Nature 260, 799–802 (1976).

An ionotropic receptor is a receptor in which binding of a ligand directly gates an ion channel within the same protein complex. The binding site detects the chemical signal; the pore supplies a path across the cell membrane. At a chemical synapse, a neurotransmitter therefore changes synaptic conductance without an obligatory intervening G protein or second messenger. ^[ref]

A familiar example is the nicotinic acetylcholine receptor of skeletal muscle: acetylcholine binding opens a pore passing cations, including sodium and potassium. The muscarinic acetylcholine receptor instead uses intracellular signal transduction; the same neurotransmitter can engage different mechanisms. Direct gating does not mean that an ionotropic receptor pumps ions: electrochemical gradients drive passage through the open ion channel. Nor does “ionotropic” specify excitation. The reversal potential, initial membrane potential and other conductances determine whether the effect favors an action potential, causes hyperpolarization, or supplies shunting inhibition. ^[ref]

A concrete electrical approximation separates opening from drive. Let $N$ identical ion channels each have open-channel electrical conductance $\gamma$ and opening probability $p(t)$. At fixed membrane potential $V$, with common reversal potential $E_{\mathrm{rev}}$, the expected value of inward-positive electric current isFor stipulated values $N=100$, $\gamma =20\mathrm{pS}$, $p=0.2$, $V=-60\mathrm{mV}$ and $E_{\mathrm{rev}}=0$, the mean open count is $20$, the population electrical conductance is $0.4\mathrm{nS}$ and $I_{\mathrm{in}}=24\mathrm{pA}$. One open ion channel carries $1.2\mathrm{pA}$. These are illustrative values, not measurements. At $V=E_{\mathrm{rev}}$, the net electric current vanishes despite open ion channels; neither binding nor opening alone determines the readout. The approximation omits changes in ion concentrations and voltage-dependent open-channel electrical conductance.

A motivating experiment made the elementary electrical events visible. As Bert Sakmann recounts, chronically denervated frog muscle fibers had acetylcholine-sensitive receptors spread beyond the original nerve contact. Mild enzyme treatment exposed the cell membrane; a polished glass pipette sealed over a small patch to reduce background noise. Two intracellular electrodes held the local membrane potential through voltage clamp, while the patch pipette recorded tiny electric currents. Applying suberyldicholine, a ligand that activates the acetylcholine receptor and prolongs openings, revealed abrupt, approximately rectangular current events. Their amplitudes agreed reasonably with estimates from whole-membrane current fluctuations. This established discrete opening and closing events; it did not make every ligand response instantaneous. Background noise and finite recording bandwidth concealed sufficiently small or brief events.^[ref]

Recording an intact membrane patch alone does not exclude intracellular relays. Tank, Huganir, Greengard and Webb supplied a complementary isolation test in 1983: they purified nicotinic acetylcholine receptors from an electric ray's electric organ, incorporated them into artificial lipid membranes, and fused small vesicles into larger vesicles by freezing and thawing. Sealed glass-pipette recordings from isolated membrane patches resolved functional ion channels with properties resembling those in muscle. Removing the intact cytoplasm and its signaling machinery supports the sufficiency of the receptor complex for channel function; an artificial lipid environment still cannot reproduce every native regulatory interaction.^[ref]

Direct gating supports millisecond communication at many chemical synapses. Response duration also depends on neurotransmitter clearance, binding and channel-state transitions. Continued ligand exposure can prolong activity. Classify an ionotropic receptor by its direct connection between recognition and pore gating, rather than a universal duration cutoff. ^[ref]

A neuron is a specialized biological cell that receives, integrates and transmits signals. Its shape separates places where inputs arrive from places where outputs reach other biological cells: this functional asymmetry is neuronal polarity. Understanding a neuron therefore means connecting its anatomy to changes in membrane potential, rather than treating it as a wire that merely forwards every input.

In a common multipolar neuron, branching dendrites receive inputs at synapses; the soma contains the cell nucleus and most major organelles; the axon carries signals to distant or nearby targets; and axon terminals form output contacts. All these regions belong to one biological cell enclosed by a continuous cell membrane. An axon can branch, allowing one neuron to influence several receiving biological cells.^[ref]

At an input chemical synapse, a neurotransmitter acts on a receptor, changing an electric current directly or through signal transduction.^[ref] A resulting synaptic potential contributes to synaptic integration in the dendrites and soma. In many spiking neurons, sufficiently strong depolarization recruits voltage-gated ion channels in the axon initial segment, initiating an action potential that propagates along the axon. At an output chemical synapse, calcium entry through voltage-gated ion channels promotes synaptic vesicle exocytosis, releasing neurotransmitter. An action potential is thus regenerated electrically along a cell membrane; it is not a packet of neurotransmitter travelling from the dendrites to the axon terminals.^[ref]

The compartments are specializations, not exclusive jobs. Inputs can contact the soma or axon as well as dendrites; dendrites can support active voltage-gated ion channels. Paired recordings from a pyramidal neuron's soma and dendrite or axon established that an action potential can begin in the axon and propagate back into the dendrites. The usual output direction therefore does not make every electrical signal strictly one-way.^[ref] An electrical synapse, which directly couples cytoplasms through gap junctions, also differs from the sending-and-receiving arrangement of a chemical synapse.^[ref]

Nor does every neuron have the upper diagram's shape. A bipolar neuron has two main processes, one dendrite and one axon; a multipolar neuron has several dendrites; and a pseudounipolar neuron has a single process from the soma that divides into peripheral and central branches. In the last arrangement, sensory signals can travel past the soma rather than obligatorily through it. These shape categories do not specify every neuron's receptor, connectivity or firing behavior.^[ref] Some neurons in the retina communicate through graded changes in membrane potential without generating action potentials.^[ref]

Why timing changes the computation. Synaptic integration can combine inputs at different locations, called spatial summation, and inputs arriving at different times, called temporal summation. A minimal example uses the leaky integrate-and-fire model with the illustrative parameters already given there: resting and reset membrane potential $-65\mathrm{mV}$, firing threshold $-50\mathrm{mV}$, electrical resistance $R=100\mathrm{M\Omega }$, capacitance $C=200\mathrm{pF}$, time constant $\tau =RC=20\mathrm{ms}$ and neuronal refractory period $2\mathrm{ms}$. These are chosen model values, not measured properties of a particular neuron. Before firing, a constant inward electric current $I$ starting from rest givesThe exponential function expresses the competition between charging the cell membrane's capacitance and leakage through its electrical resistance.^[ref]

Two $100\mathrm{pA}$ inputs, each lasting $40\mathrm{ms}$, produce different outputs depending on their timing. Either input alone reaches only $-56.3534\mathrm{mV}$. Applied together, they give $I=200\mathrm{pA}$ and reach threshold after $20\ln 4\mathrm{ms}\approx 27.7259\mathrm{ms}$, producing one action potential event during the pulse. If instead the second input begins $20\mathrm{ms}$ after the first ends, the earlier depolarization has partly decayed: the second pulse peaks at approximately $-55.9229\mathrm{mV}$ and neither pulse produces an action potential. The two-input protocols deliver the same total electric charge, $8\mathrm{pC}$, yet only the coincident protocol fires. Counting total input alone misses this timing dependence.

This example makes a neuron a detector of sufficiently clustered input, not a perfect logical gate: different parameters change the result. Actual dendrites introduce location-dependent filtering and active responses, and an inhibitory postsynaptic potential or shunting inhibition can change whether another input succeeds. The single-compartment leaky integrate-and-fire model omits these mechanisms.^[ref] Across connected neurons, branching axons distribute outputs while converging synapses combine inputs; spike trains can support temporal coding and rate coding, and synaptic plasticity changes the influence of an input. Connectivity and cellular dynamics together determine the computation.^[ref][ref]

Testing the connection between structure and function. Whole-cell recording connects anatomy to a measured membrane potential. In a published mouse protocol, a two-photon microscope guides solution-filled glass pipettes to neurons; an amplifier and bath reference electrode complete the electrical recording apparatus. A high-resistance seal forms against the cell membrane, then brief suction opens the membrane patch beneath the tip. In current clamp, the amplifier supplies a chosen electric current and records the resulting membrane potential, unlike voltage clamp, which controls voltage and measures electric current. The investigators used $500\mathrm{ms}$ current steps of several amplitudes to characterize excitability and firing, and negative current pulses to estimate input electrical resistance.^[ref]

The observable is a voltage trace, including graded responses and action potentials. Comparing injected electric current with that trace tests how input becomes output; it does not identify every underlying ion channel. The protocol checks access electrical resistance, which can distort voltage and action potential measurements, and includes intervals without stimulation to record spontaneous activity. In a teaching replication, repeated zero-input trials and monitoring baseline drift would provide further controls; these are recommended comparisons, not additional results attributed to the paper. A recording at the soma also cannot establish the local voltage everywhere in a branching dendrite, and this anesthetized preparation does not establish behavior in every awake neuron.^[ref]

A complementary experiment used simultaneous whole-cell recordings from the soma and an apical dendrite or axon of the same pyramidal neuron in a brain slice. The relative onset times of action potentials, together with sodium currents in excised dendrite membrane patches, supported axonal initiation followed by active propagation into dendrites. Pairing sites within one neuron is a useful comparison because it avoids confusing differences between cells with differences between compartments. Instrument timing and comparable recording quality would be essential controls when reproducing the inference. Only the published abstract was accessible here, so no unverified timing values, drug controls or channel distributions are supplied.^[ref]

The periodic table arranges chemical elements in increasing atomic number, across successive periodic table periods. Its columns are periodic groups, numbered 1–18. The layout places recurring outer electron configurations above one another, making similarities in chemical bonds and chemical reactions easier to recognize. Ordering is by proton count, not by mass; the mass number of a particular isotope does not determine its box. See the official IUPAC periodic table and numbering conventions.

For the first eighteen neutral chemical atoms in their ground states, a compact description counts Electrons in successive electron shells. Thus carbon has $(2,4)$, meaning two Electrons in the first electron shell and four in the second; the sum $2+4=6$ agrees with its atomic number. Sodium has $(2,8,1)$, whose sum is $11$. These are occupancy counts, not circular trajectories of Electrons.

Reading each row from left to right gives:

The counting outline is short: the occupied electron subshells in this range are $1s$, $2s$, $2p$, $3s$, and $3p$, filled in that order for these neutral ground states. Each $s$ electron subshell holds up to two Electrons and each $p$ electron subshell up to six, giving $2$, $2+6=8$, and $2+6=8$ along these three rows. This $2,8,8$ summary applies only through argon; it is not a general rule that each electron shell fills completely before the next begins, nor a claim that the third electron shell can hold only eight Electrons. See Flowers et al., Chemistry 2e, electronic structure and electron configurations.

The recurring outer counts make the arrangement useful. Lithium and sodium each have one valence electron, whereas fluorine and chlorine each have seven valence electrons. Such similarities help anticipate chemical reactions, without making all properties identical throughout a periodic group. Helium is an instructive exception to an eight-Electron shortcut: its two Electrons complete the first electron shell, so it belongs above neon and argon in periodic group 18. Hydrogen shares column 1 with lithium and sodium but has its own distinct chemistry. See Flowers et al., Chemistry 2e, periodic-table organization.

A reversal potential $E_{\mathrm{rev}}$ is a membrane potential at which a specified open ion channel, or specified combination of ion channels, carries zero net electric current, with the surrounding conditions fixed; the electric current changes sign across that voltage. Specifying which current matters: an individual ion contribution and a sum of several contributions can reverse at different voltages. Zero net electric current does not mean that all ions have stopped moving. See Purves et al., Neuroscience, 2nd edition (2001): reversal of a mixed-ion channel current.

Throughout these examples, membrane potential is $V=V_{\mathrm{inside}}-V_{\mathrm{outside}}$, and conventional current is inward-positive. Positive electric current corresponds to net positive electric charge entering or net negative electric charge leaving. Negative electric current corresponds to the reverse charge transfer. A convenient Ohmic approximation iswhere $g$ is the available electrical conductance. For fixed $g>0$, $V<E_{\mathrm{rev}}$ gives positive electric current, $V=E_{\mathrm{rev}}$ gives zero, and $V>E_{\mathrm{rev}}$ gives negative electric current; the line has slope $-g$. If $g=0$, the modeled pathway carries zero electric current at every voltage: closing it does not locate its reversal potential. 3.1 Synapses (§3.1: conductance-based synaptic current) uses outward-positive $g(V-E)$; the formula here reverses that sign to match this wiki's inward-positive convention.

For the stipulated single-pathway example from ion channel, $E_{\mathrm{rev}}=-80\mathrm{mV}$ and $g=10\mathrm{nS}$ giveThe open ion channel carries zero net electric current at $-80\mathrm{mV}$ even though $g$ remains positive. Near that point a change of membrane potential changes the electric current, which is why zero current at one voltage does not make an open pathway electrically irrelevant; see shunting inhibition.

For an ion channel passing only one ion species by passive transport, its reversal potential can equal that species' Nernst equilibrium potential, where the chemical and electrical contributions to electrochemical potential balance. At that thermodynamic equilibrium, passage in both directions can continue with no net transport. For an ion channel admitting several ion species, opposing contributions can cancel while each species continues to have net transport. Such a reversal potential is not generally any one species' Nernst equilibrium potential. See the Purves reference above.

To work out that cancellation explicitly, put two Ohmic ion channel populations across the same cell membrane. Stipulate constant electrical conductances and fixed reversal potentials:The potassium and sodium contributions add because both pathways experience the same membrane potential:Thus $I_{\mathrm{total}}=12\mathrm{nS}(E_{\mathrm{eff}}-V)$. This weighted mean follows simply by expanding and regrouping the two current terms; it assumes additive Ohmic contributions and a positive total electrical conductance. At $V=E_{\mathrm{eff}}$, the inward-positive individual electric currents areThe potassium contribution is outward and the sodium contribution inward. Equal and opposite electric currents give $I_{\mathrm{total}}=0$; neither pathway has stopped transporting its ions. The calculation treats two distinct pathways. Applying it to one mixed-species ion channel would additionally require a justified decomposition into independent Ohmic contributions; a general mixed-channel reversal potential cannot be obtained by assuming those hypotheses silently.

This is an instantaneous balance of the specified passive electric currents. It would be the stationary voltage of a passive capacitance model containing only these constant pathways and no applied electric current, but it is not a complete prediction of a living cell's resting membrane potential. Other electric currents, voltage-dependent gating, and pumps involved in active transport can matter. Pumps that transfer net electric charge are electrogenic and contribute their own electric current. See Purves et al.: functional properties of the sodium/potassium pump.

The toy model holds ion concentrations and therefore the stipulated reversal potentials fixed. Continuing inward sodium and outward potassium transport would change finite reservoirs unless active transport or external control maintained them. Transport can be a small fraction of the reservoir's ions over a short interval, making fixed concentrations a useful approximation; it is not a claim that the reservoirs never change. See Gerstner et al., Neuronal Dynamics (2014), §2.1: equilibrium potentials, channel currents and maintained gradients.

A reversal potential makes the effect of opening an ion channel predictable from the present membrane potential. The same open pathway can carry inward or outward electric current as $V$ crosses its reversal potential. The two-pathway example reveals a particularly useful distinction: zero net charge transfer can coexist with continuing exchange of different substances. That distinction connects membrane transport to electric current measurements without mistaking electrical balance for thermodynamic equilibrium.

Sodium chloride contains sodium cations ${\mathrm{Na}}^{+}$ and chlorine anions ${\mathrm{Cl}}^{-}$ in a $1:1$ ratio; its formula unit has zero net electric charge.

An ionic compound of sodium cations and hydrogen anions. Its oxidation state assignments are $+1$ for sodium and $-1$ for hydrogen.

The standard enthalpy of formation is the enthalpy change for forming one mole of a specified chemical substance from its chemical elements in their reference states at the stated temperature. For sodium chloride at $298.15\mathrm{K}$, those reactant states are solid sodium and diatomic gaseous chlorine. Standard state specifies conditions; it does not by itself select a temperature.